Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
NRXN3Q9Y4C0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.99■■■□□ 2.71
NRXN3Q9Y4C0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
NRXN3Q9Y4C0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC31.99■■■□□ 2.71
NRXN3Q9Y4C0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC31.99■■■□□ 2.71
NRXN3Q9Y4C0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
NRXN3Q9Y4C0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC31.99■■■□□ 2.71
NRXN3Q9Y4C0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
NRXN3Q9Y4C0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
NRXN3Q9Y4C0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC31.98■■■□□ 2.71
NRXN3Q9Y4C0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.98■■■□□ 2.71
NRXN3Q9Y4C0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.98■■■□□ 2.71
NRXN3Q9Y4C0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
NRXN3Q9Y4C0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
NRXN3Q9Y4C0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
NRXN3Q9Y4C0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NRXN3Q9Y4C0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
NRXN3Q9Y4C0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC31.96■■■□□ 2.71
NRXN3Q9Y4C0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
NRXN3Q9Y4C0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
NRXN3Q9Y4C0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NRXN3Q9Y4C0 NT5C3AP1-201ENST00000394500 1012 ntBASIC31.95■■■□□ 2.71
NRXN3Q9Y4C0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31.95■■■□□ 2.71
NRXN3Q9Y4C0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.95■■■□□ 2.71
NRXN3Q9Y4C0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC31.95■■■□□ 2.71
NRXN3Q9Y4C0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC31.95■■■□□ 2.71
NRXN3Q9Y4C0 AC145676.1-201ENST00000514988 2004 ntBASIC31.94■■■□□ 2.7
NRXN3Q9Y4C0 TPRG1LP1-201ENST00000598702 760 ntBASIC31.94■■■□□ 2.7
NRXN3Q9Y4C0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC31.94■■■□□ 2.7
NRXN3Q9Y4C0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.94■■■□□ 2.7
NRXN3Q9Y4C0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
NRXN3Q9Y4C0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NRXN3Q9Y4C0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 HLA-L-209ENST00000420110 1011 ntBASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
NRXN3Q9Y4C0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC31.92■■■□□ 2.7
NRXN3Q9Y4C0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC31.91■■■□□ 2.7
NRXN3Q9Y4C0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.91■■■□□ 2.7
NRXN3Q9Y4C0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NRXN3Q9Y4C0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NRXN3Q9Y4C0 NTF6G-201ENST00000591094 616 ntBASIC31.9■■■□□ 2.7
NRXN3Q9Y4C0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC31.9■■■□□ 2.7
NRXN3Q9Y4C0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.9■■■□□ 2.7
NRXN3Q9Y4C0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
NRXN3Q9Y4C0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
NRXN3Q9Y4C0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NRXN3Q9Y4C0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.89■■■□□ 2.7
NRXN3Q9Y4C0 AC006015.1-201ENST00000429970 570 ntBASIC31.89■■■□□ 2.7
NRXN3Q9Y4C0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.89■■■□□ 2.7
NRXN3Q9Y4C0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
NRXN3Q9Y4C0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
NRXN3Q9Y4C0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC31.89■■■□□ 2.7
NRXN3Q9Y4C0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC31.89■■■□□ 2.7
NRXN3Q9Y4C0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
NRXN3Q9Y4C0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC31.88■■■□□ 2.69
NRXN3Q9Y4C0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NRXN3Q9Y4C0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NRXN3Q9Y4C0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC31.88■■■□□ 2.69
NRXN3Q9Y4C0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.88■■■□□ 2.69
NRXN3Q9Y4C0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NRXN3Q9Y4C0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC31.87■■■□□ 2.69
NRXN3Q9Y4C0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.87■■■□□ 2.69
NRXN3Q9Y4C0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NRXN3Q9Y4C0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
NRXN3Q9Y4C0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
NRXN3Q9Y4C0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
NRXN3Q9Y4C0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
NRXN3Q9Y4C0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.86■■■□□ 2.69
NRXN3Q9Y4C0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.86■■■□□ 2.69
NRXN3Q9Y4C0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.86■■■□□ 2.69
NRXN3Q9Y4C0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NRXN3Q9Y4C0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.86■■■□□ 2.69
NRXN3Q9Y4C0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NRXN3Q9Y4C0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms