Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC35■■■■□ 3.19
CDK11AQ9UQ88 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC35■■■■□ 3.19
CDK11AQ9UQ88 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
CDK11AQ9UQ88 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC35■■■■□ 3.19
CDK11AQ9UQ88 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
CDK11AQ9UQ88 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC35■■■■□ 3.19
CDK11AQ9UQ88 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 CCDC92B-201ENST00000575506 885 ntBASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDK11AQ9UQ88 AP003733.4-201ENST00000623785 1697 ntBASIC34.98■■■■□ 3.19
CDK11AQ9UQ88 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CDK11AQ9UQ88 DUX4L4-201ENST00000566884 1269 ntBASIC34.98■■■■□ 3.19
CDK11AQ9UQ88 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC34.98■■■■□ 3.19
CDK11AQ9UQ88 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
CDK11AQ9UQ88 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC34.98■■■■□ 3.19
CDK11AQ9UQ88 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
CDK11AQ9UQ88 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
CDK11AQ9UQ88 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC34.97■■■■□ 3.19
CDK11AQ9UQ88 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC34.97■■■■□ 3.19
CDK11AQ9UQ88 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC34.97■■■■□ 3.19
CDK11AQ9UQ88 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC34.97■■■■□ 3.19
CDK11AQ9UQ88 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
CDK11AQ9UQ88 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
CDK11AQ9UQ88 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
CDK11AQ9UQ88 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
CDK11AQ9UQ88 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC34.96■■■■□ 3.19
CDK11AQ9UQ88 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC34.96■■■■□ 3.19
CDK11AQ9UQ88 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
CDK11AQ9UQ88 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
CDK11AQ9UQ88 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC34.95■■■■□ 3.19
CDK11AQ9UQ88 AC010525.1-201ENST00000585559 441 ntBASIC34.95■■■■□ 3.19
CDK11AQ9UQ88 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
CDK11AQ9UQ88 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
CDK11AQ9UQ88 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC34.95■■■■□ 3.18
CDK11AQ9UQ88 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC34.95■■■■□ 3.18
CDK11AQ9UQ88 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
CDK11AQ9UQ88 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
CDK11AQ9UQ88 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC34.94■■■■□ 3.18
CDK11AQ9UQ88 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CDK11AQ9UQ88 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC34.93■■■■□ 3.18
CDK11AQ9UQ88 TERF1P2-201ENST00000583350 1212 ntBASIC34.93■■■■□ 3.18
CDK11AQ9UQ88 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CDK11AQ9UQ88 SHF-207ENST00000560540 2062 ntTSL 5 BASIC34.93■■■■□ 3.18
CDK11AQ9UQ88 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 LHPP-203ENST00000392757 840 ntTSL 3 BASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 AP005435.1-201ENST00000529293 1178 ntBASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
CDK11AQ9UQ88 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC34.91■■■■□ 3.18
CDK11AQ9UQ88 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC34.91■■■■□ 3.18
CDK11AQ9UQ88 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CDK11AQ9UQ88 LINC02228-203ENST00000641970 1355 ntBASIC34.91■■■■□ 3.18
CDK11AQ9UQ88 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC34.91■■■■□ 3.18
CDK11AQ9UQ88 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC34.91■■■■□ 3.18
CDK11AQ9UQ88 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CDK11AQ9UQ88 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
CDK11AQ9UQ88 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CDK11AQ9UQ88 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CDK11AQ9UQ88 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC34.9■■■■□ 3.18
CDK11AQ9UQ88 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CDK11AQ9UQ88 KRT18P14-201ENST00000534205 1250 ntBASIC34.9■■■■□ 3.18
CDK11AQ9UQ88 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC34.9■■■■□ 3.18
CDK11AQ9UQ88 TMEM202-AS1-202ENST00000565181 2325 ntBASIC34.9■■■■□ 3.18
CDK11AQ9UQ88 AC022211.4-201ENST00000625094 2161 ntBASIC34.9■■■■□ 3.18
CDK11AQ9UQ88 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDK11AQ9UQ88 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDK11AQ9UQ88 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDK11AQ9UQ88 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDK11AQ9UQ88 NTF6G-201ENST00000591094 616 ntBASIC34.89■■■■□ 3.18
CDK11AQ9UQ88 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CDK11AQ9UQ88 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC34.89■■■■□ 3.18
CDK11AQ9UQ88 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC34.89■■■■□ 3.18
CDK11AQ9UQ88 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDK11AQ9UQ88 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CDK11AQ9UQ88 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC34.87■■■■□ 3.17
CDK11AQ9UQ88 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC34.87■■■■□ 3.17
CDK11AQ9UQ88 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
CDK11AQ9UQ88 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CDK11AQ9UQ88 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
CDK11AQ9UQ88 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC34.87■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms