Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 GPX1P1-201ENST00000388829 606 ntBASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
ZC3H4Q9UPT8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ZC3H4Q9UPT8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.43■■□□□ 1.98
ZC3H4Q9UPT8 AC133637.1-201ENST00000624115 1537 ntBASIC27.43■■□□□ 1.98
ZC3H4Q9UPT8 AC091060.1-201ENST00000623524 1766 ntBASIC27.43■■□□□ 1.98
ZC3H4Q9UPT8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
ZC3H4Q9UPT8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.42■■□□□ 1.98
ZC3H4Q9UPT8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.42■■□□□ 1.98
ZC3H4Q9UPT8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZC3H4Q9UPT8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZC3H4Q9UPT8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZC3H4Q9UPT8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
ZC3H4Q9UPT8 AC105233.4-201ENST00000642045 216 ntBASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 MIR663A-201ENST00000385250 93 ntBASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC27.41■■□□□ 1.98
ZC3H4Q9UPT8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.4■■□□□ 1.98
ZC3H4Q9UPT8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZC3H4Q9UPT8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZC3H4Q9UPT8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.4■■□□□ 1.98
ZC3H4Q9UPT8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.4■■□□□ 1.98
ZC3H4Q9UPT8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
ZC3H4Q9UPT8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC27.4■■□□□ 1.98
ZC3H4Q9UPT8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
ZC3H4Q9UPT8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC27.39■■□□□ 1.98
ZC3H4Q9UPT8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ZC3H4Q9UPT8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ZC3H4Q9UPT8 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.39■■□□□ 1.97
ZC3H4Q9UPT8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.39■■□□□ 1.97
ZC3H4Q9UPT8 TPRG1LP1-201ENST00000598702 760 ntBASIC27.39■■□□□ 1.97
ZC3H4Q9UPT8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 AP004607.4-201ENST00000530158 1459 ntBASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 KRT18P11-201ENST00000435214 1283 ntBASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.38■■□□□ 1.97
ZC3H4Q9UPT8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.37■■□□□ 1.97
ZC3H4Q9UPT8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
ZC3H4Q9UPT8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.36■■□□□ 1.97
ZC3H4Q9UPT8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZC3H4Q9UPT8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
ZC3H4Q9UPT8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.36■■□□□ 1.97
ZC3H4Q9UPT8 KRT18P6-201ENST00000555540 1265 ntBASIC27.36■■□□□ 1.97
ZC3H4Q9UPT8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.36■■□□□ 1.97
ZC3H4Q9UPT8 KRT19P1-201ENST00000405746 1186 ntBASIC27.35■■□□□ 1.97
ZC3H4Q9UPT8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZC3H4Q9UPT8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC27.35■■□□□ 1.97
ZC3H4Q9UPT8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZC3H4Q9UPT8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 DUX4L4-201ENST00000566884 1269 ntBASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 AL161729.1-201ENST00000604104 1402 ntBASIC27.34■■□□□ 1.97
ZC3H4Q9UPT8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3H4Q9UPT8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms