Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCF1Q9UBD9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCF1Q9UBD9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCF1Q9UBD9 RASA4CP-201ENST00000424092 1398 ntBASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 CA15P2-201ENST00000611168 834 ntBASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCF1Q9UBD9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 AC144652.1-201ENST00000609974 1624 ntBASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 DUX4L4-201ENST00000566884 1269 ntBASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCF1Q9UBD9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 AC099791.1-201ENST00000416440 715 ntBASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 BX842568.3-201ENST00000418104 571 ntBASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 AC008764.7-201ENST00000593779 1081 ntBASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCF1Q9UBD9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 AL499627.2-201ENST00000606283 725 ntBASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.94■□□□□ 0.78
CLCF1Q9UBD9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 AC233992.3-201ENST00000607491 485 ntBASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CLCF1Q9UBD9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 AC133637.1-201ENST00000624115 1537 ntBASIC19.92■□□□□ 0.78
CLCF1Q9UBD9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 LINC01529-204ENST00000636474 1715 ntBASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCF1Q9UBD9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCF1Q9UBD9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.9■□□□□ 0.78
CLCF1Q9UBD9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms