Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
KCNIP1Q9NZI2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 AC103834.1-201ENST00000520383 144 ntBASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 AC103724.3-201ENST00000564481 992 ntBASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNIP1Q9NZI2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KCNIP1Q9NZI2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 AL031848.2-201ENST00000607670 837 ntBASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNIP1Q9NZI2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
KCNIP1Q9NZI2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNIP1Q9NZI2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 AC137630.3-201ENST00000607245 391 ntBASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNIP1Q9NZI2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 SNX5-217ENST00000606557 1087 ntBASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCNIP1Q9NZI2 AC079630.1-202ENST00000618127 1840 ntBASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms