Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PCDH11XQ9BZA7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDH11XQ9BZA7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC29.47■■■□□ 2.31
PCDH11XQ9BZA7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDH11XQ9BZA7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PCDH11XQ9BZA7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDH11XQ9BZA7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDH11XQ9BZA7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDH11XQ9BZA7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDH11XQ9BZA7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC29.45■■■□□ 2.31
PCDH11XQ9BZA7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDH11XQ9BZA7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDH11XQ9BZA7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.45■■■□□ 2.31
PCDH11XQ9BZA7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
PCDH11XQ9BZA7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.45■■■□□ 2.3
PCDH11XQ9BZA7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.45■■■□□ 2.3
PCDH11XQ9BZA7 TERF1P2-201ENST00000583350 1212 ntBASIC29.45■■■□□ 2.3
PCDH11XQ9BZA7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDH11XQ9BZA7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
PCDH11XQ9BZA7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.44■■■□□ 2.3
PCDH11XQ9BZA7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC29.44■■■□□ 2.3
PCDH11XQ9BZA7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDH11XQ9BZA7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC29.44■■■□□ 2.3
PCDH11XQ9BZA7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.44■■■□□ 2.3
PCDH11XQ9BZA7 KRT18P14-201ENST00000534205 1250 ntBASIC29.44■■■□□ 2.3
PCDH11XQ9BZA7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
PCDH11XQ9BZA7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
PCDH11XQ9BZA7 AC004911.1-201ENST00000416316 871 ntBASIC29.43■■■□□ 2.3
PCDH11XQ9BZA7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.43■■■□□ 2.3
PCDH11XQ9BZA7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
PCDH11XQ9BZA7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 DUX4L4-201ENST00000566884 1269 ntBASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDH11XQ9BZA7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 FP325331.1-202ENST00000623531 1380 ntBASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 LINC02228-203ENST00000641970 1355 ntBASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PCDH11XQ9BZA7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PCDH11XQ9BZA7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.4■■■□□ 2.3
PCDH11XQ9BZA7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.4■■■□□ 2.3
PCDH11XQ9BZA7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PCDH11XQ9BZA7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
PCDH11XQ9BZA7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDH11XQ9BZA7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PCDH11XQ9BZA7 AP003733.4-201ENST00000623785 1697 ntBASIC29.39■■■□□ 2.3
PCDH11XQ9BZA7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
PCDH11XQ9BZA7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PCDH11XQ9BZA7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PCDH11XQ9BZA7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC29.39■■■□□ 2.3
PCDH11XQ9BZA7 NTF6G-201ENST00000591094 616 ntBASIC29.39■■■□□ 2.3
PCDH11XQ9BZA7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC29.39■■■□□ 2.29
PCDH11XQ9BZA7 AC022211.4-201ENST00000625094 2161 ntBASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDH11XQ9BZA7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCDH11XQ9BZA7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PCDH11XQ9BZA7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
PCDH11XQ9BZA7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PCDH11XQ9BZA7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
PCDH11XQ9BZA7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC29.37■■■□□ 2.29
PCDH11XQ9BZA7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCDH11XQ9BZA7 AC135731.1-201ENST00000569415 2548 ntBASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 AP005435.1-201ENST00000529293 1178 ntBASIC29.36■■■□□ 2.29
PCDH11XQ9BZA7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms