Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.98□□□□□ -0.01
LITAFQ99732 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LITAFQ99732 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LITAFQ99732 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LITAFQ99732 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LITAFQ99732 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LITAFQ99732 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LITAFQ99732 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC14.97□□□□□ -0.01
LITAFQ99732 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LITAFQ99732 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LITAFQ99732 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LITAFQ99732 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.97□□□□□ -0.01
LITAFQ99732 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LITAFQ99732 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC14.97□□□□□ -0.01
LITAFQ99732 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LITAFQ99732 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.96□□□□□ -0.01
LITAFQ99732 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LITAFQ99732 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LITAFQ99732 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LITAFQ99732 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LITAFQ99732 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LITAFQ99732 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LITAFQ99732 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LITAFQ99732 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LITAFQ99732 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.96□□□□□ -0.01
LITAFQ99732 AL157400.5-201ENST00000507624 621 ntBASIC14.96□□□□□ -0.01
LITAFQ99732 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LITAFQ99732 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LITAFQ99732 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LITAFQ99732 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LITAFQ99732 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LITAFQ99732 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.95□□□□□ -0.02
LITAFQ99732 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.95□□□□□ -0.02
LITAFQ99732 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC14.95□□□□□ -0.02
LITAFQ99732 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC14.95□□□□□ -0.02
LITAFQ99732 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.95□□□□□ -0.02
LITAFQ99732 AC010542.4-201ENST00000563151 1910 ntBASIC14.95□□□□□ -0.02
LITAFQ99732 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LITAFQ99732 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LITAFQ99732 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.94□□□□□ -0.02
LITAFQ99732 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
LITAFQ99732 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LITAFQ99732 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LITAFQ99732 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
LITAFQ99732 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LITAFQ99732 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.93□□□□□ -0.02
LITAFQ99732 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LITAFQ99732 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LITAFQ99732 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LITAFQ99732 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LITAFQ99732 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LITAFQ99732 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LITAFQ99732 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
LITAFQ99732 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LITAFQ99732 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LITAFQ99732 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LITAFQ99732 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.93□□□□□ -0.02
LITAFQ99732 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.92□□□□□ -0.02
LITAFQ99732 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.92□□□□□ -0.02
LITAFQ99732 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.92□□□□□ -0.02
LITAFQ99732 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LITAFQ99732 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LITAFQ99732 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LITAFQ99732 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LITAFQ99732 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms