Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTP4A1Q93096 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
PTP4A1Q93096 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.12■□□□□ 0.81
PTP4A1Q93096 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTP4A1Q93096 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PTP4A1Q93096 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.12■□□□□ 0.81
PTP4A1Q93096 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTP4A1Q93096 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PTP4A1Q93096 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
PTP4A1Q93096 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.11■□□□□ 0.81
PTP4A1Q93096 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.11■□□□□ 0.81
PTP4A1Q93096 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTP4A1Q93096 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTP4A1Q93096 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTP4A1Q93096 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTP4A1Q93096 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTP4A1Q93096 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.11■□□□□ 0.81
PTP4A1Q93096 AC004448.1-201ENST00000458332 883 ntBASIC20.11■□□□□ 0.81
PTP4A1Q93096 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTP4A1Q93096 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PTP4A1Q93096 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PTP4A1Q93096 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTP4A1Q93096 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PTP4A1Q93096 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.1■□□□□ 0.81
PTP4A1Q93096 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.1■□□□□ 0.81
PTP4A1Q93096 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.1■□□□□ 0.81
PTP4A1Q93096 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.1■□□□□ 0.81
PTP4A1Q93096 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PTP4A1Q93096 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.1■□□□□ 0.81
PTP4A1Q93096 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTP4A1Q93096 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTP4A1Q93096 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTP4A1Q93096 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTP4A1Q93096 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.09■□□□□ 0.81
PTP4A1Q93096 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.09■□□□□ 0.81
PTP4A1Q93096 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTP4A1Q93096 ESRRAP2-201ENST00000418437 1549 ntBASIC20.09■□□□□ 0.81
PTP4A1Q93096 AC103834.1-201ENST00000520383 144 ntBASIC20.09■□□□□ 0.81
PTP4A1Q93096 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTP4A1Q93096 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PTP4A1Q93096 MIR4281-201ENST00000580852 62 ntBASIC20.09■□□□□ 0.81
PTP4A1Q93096 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTP4A1Q93096 AL024507.2-201ENST00000606070 2574 ntBASIC20.09■□□□□ 0.81
PTP4A1Q93096 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PTP4A1Q93096 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTP4A1Q93096 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTP4A1Q93096 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTP4A1Q93096 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.08■□□□□ 0.81
PTP4A1Q93096 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.08■□□□□ 0.81
PTP4A1Q93096 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PTP4A1Q93096 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTP4A1Q93096 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PTP4A1Q93096 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.08■□□□□ 0.81
PTP4A1Q93096 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.08■□□□□ 0.81
PTP4A1Q93096 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.08■□□□□ 0.81
PTP4A1Q93096 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PTP4A1Q93096 KRT8P33-201ENST00000508125 1423 ntBASIC20.08■□□□□ 0.8
PTP4A1Q93096 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.08■□□□□ 0.8
PTP4A1Q93096 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTP4A1Q93096 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTP4A1Q93096 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.07■□□□□ 0.8
PTP4A1Q93096 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTP4A1Q93096 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
PTP4A1Q93096 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.07■□□□□ 0.8
PTP4A1Q93096 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.07■□□□□ 0.8
PTP4A1Q93096 THA1P-201ENST00000590384 1145 ntBASIC20.07■□□□□ 0.8
PTP4A1Q93096 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.07■□□□□ 0.8
PTP4A1Q93096 AC127496.7-201ENST00000625110 1798 ntBASIC20.07■□□□□ 0.8
PTP4A1Q93096 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTP4A1Q93096 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTP4A1Q93096 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTP4A1Q93096 AL353803.4-201ENST00000565882 1934 ntBASIC20.06■□□□□ 0.8
PTP4A1Q93096 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.06■□□□□ 0.8
PTP4A1Q93096 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTP4A1Q93096 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTP4A1Q93096 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
PTP4A1Q93096 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTP4A1Q93096 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTP4A1Q93096 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTP4A1Q93096 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTP4A1Q93096 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTP4A1Q93096 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.05■□□□□ 0.8
PTP4A1Q93096 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTP4A1Q93096 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTP4A1Q93096 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTP4A1Q93096 AC242852.2-201ENST00000615738 1807 ntBASIC20.05■□□□□ 0.8
PTP4A1Q93096 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTP4A1Q93096 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.05■□□□□ 0.8
PTP4A1Q93096 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTP4A1Q93096 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTP4A1Q93096 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.05■□□□□ 0.8
PTP4A1Q93096 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms