Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.63■■□□□ 1.69
TNFRSF25Q93038 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.62■■□□□ 1.69
TNFRSF25Q93038 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.62■■□□□ 1.69
TNFRSF25Q93038 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
TNFRSF25Q93038 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 AL356740.2-201ENST00000601559 647 ntBASIC25.61■■□□□ 1.69
TNFRSF25Q93038 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TNFRSF25Q93038 AC068473.5-201ENST00000616428 2072 ntBASIC25.6■■□□□ 1.69
TNFRSF25Q93038 FP325331.1-202ENST00000623531 1380 ntBASIC25.6■■□□□ 1.69
TNFRSF25Q93038 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF25Q93038 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF25Q93038 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF25Q93038 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF25Q93038 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.6■■□□□ 1.69
TNFRSF25Q93038 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.6■■□□□ 1.69
TNFRSF25Q93038 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.6■■□□□ 1.69
TNFRSF25Q93038 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TNFRSF25Q93038 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.59■■□□□ 1.69
TNFRSF25Q93038 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.59■■□□□ 1.69
TNFRSF25Q93038 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
TNFRSF25Q93038 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TNFRSF25Q93038 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.59■■□□□ 1.69
TNFRSF25Q93038 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
TNFRSF25Q93038 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TNFRSF25Q93038 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
TNFRSF25Q93038 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TNFRSF25Q93038 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TNFRSF25Q93038 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.58■■□□□ 1.69
TNFRSF25Q93038 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
TNFRSF25Q93038 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
TNFRSF25Q93038 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 DUX4L4-201ENST00000566884 1269 ntBASIC25.57■■□□□ 1.68
TNFRSF25Q93038 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 LINC01529-204ENST00000636474 1715 ntBASIC25.57■■□□□ 1.68
TNFRSF25Q93038 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TNFRSF25Q93038 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
TNFRSF25Q93038 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TNFRSF25Q93038 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TNFRSF25Q93038 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 MIR4466-201ENST00000606121 54 ntBASIC25.55■■□□□ 1.68
TNFRSF25Q93038 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.55■■□□□ 1.68
TNFRSF25Q93038 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TNFRSF25Q93038 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TNFRSF25Q93038 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
TNFRSF25Q93038 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TNFRSF25Q93038 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.54■■□□□ 1.68
TNFRSF25Q93038 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.54■■□□□ 1.68
TNFRSF25Q93038 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.54■■□□□ 1.68
TNFRSF25Q93038 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TNFRSF25Q93038 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 AC131281.2-201ENST00000520478 145 ntBASIC25.52■■□□□ 1.68
TNFRSF25Q93038 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TNFRSF25Q93038 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.51■■□□□ 1.68
TNFRSF25Q93038 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
TNFRSF25Q93038 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.51■■□□□ 1.67
TNFRSF25Q93038 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.51■■□□□ 1.67
TNFRSF25Q93038 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms