Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
RPGRQ92834 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
RPGRQ92834 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RPGRQ92834 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
RPGRQ92834 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RPGRQ92834 AC004911.1-201ENST00000416316 871 ntBASIC27.9■■■□□ 2.06
RPGRQ92834 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.9■■■□□ 2.06
RPGRQ92834 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC27.9■■■□□ 2.06
RPGRQ92834 AC010525.1-201ENST00000585559 441 ntBASIC27.9■■■□□ 2.06
RPGRQ92834 AL499627.2-201ENST00000606283 725 ntBASIC27.9■■■□□ 2.06
RPGRQ92834 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RPGRQ92834 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.9■■■□□ 2.06
RPGRQ92834 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.9■■■□□ 2.06
RPGRQ92834 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RPGRQ92834 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
RPGRQ92834 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.89■■■□□ 2.06
RPGRQ92834 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RPGRQ92834 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.89■■■□□ 2.06
RPGRQ92834 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RPGRQ92834 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
RPGRQ92834 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
RPGRQ92834 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.89■■■□□ 2.05
RPGRQ92834 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
RPGRQ92834 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RPGRQ92834 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.88■■■□□ 2.05
RPGRQ92834 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RPGRQ92834 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RPGRQ92834 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.88■■■□□ 2.05
RPGRQ92834 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.88■■■□□ 2.05
RPGRQ92834 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RPGRQ92834 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RPGRQ92834 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.88■■■□□ 2.05
RPGRQ92834 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.88■■■□□ 2.05
RPGRQ92834 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RPGRQ92834 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RPGRQ92834 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
RPGRQ92834 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.87■■■□□ 2.05
RPGRQ92834 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
RPGRQ92834 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
RPGRQ92834 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RPGRQ92834 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
RPGRQ92834 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.86■■■□□ 2.05
RPGRQ92834 OR2I1P-207ENST00000453522 948 ntBASIC27.86■■■□□ 2.05
RPGRQ92834 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RPGRQ92834 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RPGRQ92834 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.85■■■□□ 2.05
RPGRQ92834 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.85■■■□□ 2.05
RPGRQ92834 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RPGRQ92834 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.85■■■□□ 2.05
RPGRQ92834 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
RPGRQ92834 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.85■■■□□ 2.05
RPGRQ92834 KRT18P14-201ENST00000534205 1250 ntBASIC27.85■■■□□ 2.05
RPGRQ92834 NTF6G-201ENST00000591094 616 ntBASIC27.85■■■□□ 2.05
RPGRQ92834 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.85■■■□□ 2.05
RPGRQ92834 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
RPGRQ92834 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RPGRQ92834 AC135731.1-201ENST00000569415 2548 ntBASIC27.84■■■□□ 2.05
RPGRQ92834 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.84■■■□□ 2.05
RPGRQ92834 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.84■■■□□ 2.05
RPGRQ92834 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC27.84■■■□□ 2.05
RPGRQ92834 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RPGRQ92834 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RPGRQ92834 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RPGRQ92834 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
RPGRQ92834 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RPGRQ92834 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RPGRQ92834 LINC02228-203ENST00000641970 1355 ntBASIC27.84■■■□□ 2.05
RPGRQ92834 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RPGRQ92834 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.83■■■□□ 2.05
RPGRQ92834 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
RPGRQ92834 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.83■■■□□ 2.05
RPGRQ92834 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC27.83■■■□□ 2.05
RPGRQ92834 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
RPGRQ92834 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
RPGRQ92834 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
RPGRQ92834 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RPGRQ92834 LHPP-203ENST00000392757 840 ntTSL 3 BASIC27.82■■■□□ 2.04
RPGRQ92834 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RPGRQ92834 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RPGRQ92834 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.82■■■□□ 2.04
RPGRQ92834 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
RPGRQ92834 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.81■■■□□ 2.04
RPGRQ92834 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
RPGRQ92834 TERF1P2-201ENST00000583350 1212 ntBASIC27.81■■■□□ 2.04
RPGRQ92834 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RPGRQ92834 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RPGRQ92834 FP325331.1-202ENST00000623531 1380 ntBASIC27.81■■■□□ 2.04
RPGRQ92834 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RPGRQ92834 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
RPGRQ92834 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RPGRQ92834 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RPGRQ92834 DUX4L4-201ENST00000566884 1269 ntBASIC27.8■■■□□ 2.04
RPGRQ92834 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
RPGRQ92834 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RPGRQ92834 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
RPGRQ92834 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
RPGRQ92834 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.8■■■□□ 2.04
RPGRQ92834 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.79■■■□□ 2.04
RPGRQ92834 AP003733.4-201ENST00000623785 1697 ntBASIC27.79■■■□□ 2.04
RPGRQ92834 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms