Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB3Q92617 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB3Q92617 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.63■□□□□ 0.41
NPIPB3Q92617 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB3Q92617 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB3Q92617 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB3Q92617 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB3Q92617 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB3Q92617 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB3Q92617 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPB3Q92617 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB3Q92617 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NPIPB3Q92617 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.61■□□□□ 0.41
NPIPB3Q92617 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPB3Q92617 AC004448.1-201ENST00000458332 883 ntBASIC17.61■□□□□ 0.41
NPIPB3Q92617 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPB3Q92617 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB3Q92617 AC010980.1-201ENST00000587192 1142 ntBASIC17.61■□□□□ 0.41
NPIPB3Q92617 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB3Q92617 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB3Q92617 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB3Q92617 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB3Q92617 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NPIPB3Q92617 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB3Q92617 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPB3Q92617 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NPIPB3Q92617 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB3Q92617 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB3Q92617 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
NPIPB3Q92617 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPB3Q92617 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB3Q92617 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB3Q92617 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPB3Q92617 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB3Q92617 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB3Q92617 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB3Q92617 LINC00565-201ENST00000562710 2331 ntBASIC17.59■□□□□ 0.41
NPIPB3Q92617 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NPIPB3Q92617 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB3Q92617 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB3Q92617 TSPY13P-201ENST00000338964 914 ntBASIC17.59■□□□□ 0.41
NPIPB3Q92617 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB3Q92617 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB3Q92617 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPB3Q92617 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB3Q92617 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB3Q92617 LINC00526-201ENST00000581067 1875 ntBASIC17.58■□□□□ 0.41
NPIPB3Q92617 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB3Q92617 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB3Q92617 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPB3Q92617 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NPIPB3Q92617 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB3Q92617 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB3Q92617 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB3Q92617 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB3Q92617 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 CLDN5-201ENST00000403084 2357 ntBASIC17.57■□□□□ 0.4
NPIPB3Q92617 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB3Q92617 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPB3Q92617 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB3Q92617 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB3Q92617 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPB3Q92617 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB3Q92617 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB3Q92617 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
NPIPB3Q92617 ECEL1P1-201ENST00000373592 1742 ntBASIC17.56■□□□□ 0.4
NPIPB3Q92617 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPB3Q92617 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB3Q92617 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB3Q92617 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NPIPB3Q92617 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPB3Q92617 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB3Q92617 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB3Q92617 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB3Q92617 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB3Q92617 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 AL353803.4-201ENST00000565882 1934 ntBASIC17.55■□□□□ 0.4
NPIPB3Q92617 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB3Q92617 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB3Q92617 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms