Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 AC092803.2-201ENST00000564287 1899 ntBASIC24.33■■□□□ 1.48
GBF1Q92538 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
GBF1Q92538 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GBF1Q92538 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.32■■□□□ 1.48
GBF1Q92538 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GBF1Q92538 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
GBF1Q92538 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
GBF1Q92538 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
GBF1Q92538 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.32■■□□□ 1.48
GBF1Q92538 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
GBF1Q92538 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
GBF1Q92538 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
GBF1Q92538 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
GBF1Q92538 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
GBF1Q92538 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.31■■□□□ 1.48
GBF1Q92538 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
GBF1Q92538 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
GBF1Q92538 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GBF1Q92538 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.3■■□□□ 1.48
GBF1Q92538 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.3■■□□□ 1.48
GBF1Q92538 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.3■■□□□ 1.48
GBF1Q92538 AP005435.1-201ENST00000529293 1178 ntBASIC24.3■■□□□ 1.48
GBF1Q92538 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.3■■□□□ 1.48
GBF1Q92538 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
GBF1Q92538 AC080038.1-201ENST00000611274 1154 ntBASIC24.3■■□□□ 1.48
GBF1Q92538 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
GBF1Q92538 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
GBF1Q92538 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
GBF1Q92538 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
GBF1Q92538 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GBF1Q92538 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
GBF1Q92538 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GBF1Q92538 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
GBF1Q92538 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
GBF1Q92538 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
GBF1Q92538 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
GBF1Q92538 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
GBF1Q92538 AC066615.1-201ENST00000640911 628 ntBASIC24.29■■□□□ 1.48
GBF1Q92538 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
GBF1Q92538 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
GBF1Q92538 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
GBF1Q92538 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
GBF1Q92538 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
GBF1Q92538 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.28■■□□□ 1.48
GBF1Q92538 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
GBF1Q92538 TPRG1LP1-201ENST00000598702 760 ntBASIC24.28■■□□□ 1.48
GBF1Q92538 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
GBF1Q92538 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
GBF1Q92538 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
GBF1Q92538 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
GBF1Q92538 AC091060.1-201ENST00000623524 1766 ntBASIC24.28■■□□□ 1.48
GBF1Q92538 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.28■■□□□ 1.48
GBF1Q92538 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
GBF1Q92538 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.28■■□□□ 1.48
GBF1Q92538 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
GBF1Q92538 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.28■■□□□ 1.48
GBF1Q92538 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
GBF1Q92538 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
GBF1Q92538 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
GBF1Q92538 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
GBF1Q92538 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.27■■□□□ 1.48
GBF1Q92538 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
GBF1Q92538 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
GBF1Q92538 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.27■■□□□ 1.47
GBF1Q92538 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
GBF1Q92538 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
GBF1Q92538 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.26■■□□□ 1.47
GBF1Q92538 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
GBF1Q92538 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.26■■□□□ 1.47
GBF1Q92538 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.26■■□□□ 1.47
GBF1Q92538 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
GBF1Q92538 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.26■■□□□ 1.47
GBF1Q92538 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
GBF1Q92538 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.26■■□□□ 1.47
GBF1Q92538 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.26■■□□□ 1.47
GBF1Q92538 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.26■■□□□ 1.47
GBF1Q92538 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.26■■□□□ 1.47
GBF1Q92538 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.26■■□□□ 1.47
GBF1Q92538 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
GBF1Q92538 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.26■■□□□ 1.47
GBF1Q92538 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
GBF1Q92538 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
GBF1Q92538 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
GBF1Q92538 AC133637.1-201ENST00000624115 1537 ntBASIC24.25■■□□□ 1.47
GBF1Q92538 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
GBF1Q92538 CROCCP5-201ENST00000436658 830 ntBASIC24.25■■□□□ 1.47
GBF1Q92538 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
GBF1Q92538 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.25■■□□□ 1.47
GBF1Q92538 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.25■■□□□ 1.47
GBF1Q92538 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
GBF1Q92538 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
GBF1Q92538 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
GBF1Q92538 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.24■■□□□ 1.47
GBF1Q92538 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.24■■□□□ 1.47
GBF1Q92538 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.24■■□□□ 1.47
GBF1Q92538 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
GBF1Q92538 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.24■■□□□ 1.47
GBF1Q92538 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
GBF1Q92538 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
GBF1Q92538 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms