Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHC3Q92529 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SHC3Q92529 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SHC3Q92529 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SHC3Q92529 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SHC3Q92529 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SHC3Q92529 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHC3Q92529 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHC3Q92529 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.98■■□□□ 1.43
SHC3Q92529 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.98■■□□□ 1.43
SHC3Q92529 MIR6724-1-201ENST00000616420 92 ntBASIC23.98■■□□□ 1.43
SHC3Q92529 MIR6724-2-201ENST00000616483 92 ntBASIC23.98■■□□□ 1.43
SHC3Q92529 MIR6724-4-201ENST00000617390 92 ntBASIC23.98■■□□□ 1.43
SHC3Q92529 MIR6724-3-201ENST00000622482 92 ntBASIC23.98■■□□□ 1.43
SHC3Q92529 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHC3Q92529 AC009102.2-201ENST00000606772 1639 ntBASIC23.98■■□□□ 1.43
SHC3Q92529 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.98■■□□□ 1.43
SHC3Q92529 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHC3Q92529 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
SHC3Q92529 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.98■■□□□ 1.43
SHC3Q92529 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SHC3Q92529 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.97■■□□□ 1.43
SHC3Q92529 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHC3Q92529 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SHC3Q92529 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SHC3Q92529 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
SHC3Q92529 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SHC3Q92529 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.97■■□□□ 1.43
SHC3Q92529 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.97■■□□□ 1.43
SHC3Q92529 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SHC3Q92529 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHC3Q92529 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHC3Q92529 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHC3Q92529 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.96■■□□□ 1.43
SHC3Q92529 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SHC3Q92529 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.96■■□□□ 1.43
SHC3Q92529 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SHC3Q92529 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHC3Q92529 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHC3Q92529 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.95■■□□□ 1.43
SHC3Q92529 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.95■■□□□ 1.42
SHC3Q92529 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHC3Q92529 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.95■■□□□ 1.42
SHC3Q92529 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.95■■□□□ 1.42
SHC3Q92529 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
SHC3Q92529 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SHC3Q92529 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.95■■□□□ 1.42
SHC3Q92529 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.94■■□□□ 1.42
SHC3Q92529 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHC3Q92529 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
SHC3Q92529 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.94■■□□□ 1.42
SHC3Q92529 FP325331.1-202ENST00000623531 1380 ntBASIC23.94■■□□□ 1.42
SHC3Q92529 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHC3Q92529 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHC3Q92529 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.94■■□□□ 1.42
SHC3Q92529 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SHC3Q92529 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SHC3Q92529 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHC3Q92529 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHC3Q92529 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHC3Q92529 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHC3Q92529 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHC3Q92529 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHC3Q92529 KRT16P3-201ENST00000439127 1283 ntBASIC23.93■■□□□ 1.42
SHC3Q92529 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.93■■□□□ 1.42
SHC3Q92529 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
SHC3Q92529 C1orf229-201ENST00000623686 2258 ntBASIC23.93■■□□□ 1.42
SHC3Q92529 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHC3Q92529 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.92■■□□□ 1.42
SHC3Q92529 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.92■■□□□ 1.42
SHC3Q92529 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.92■■□□□ 1.42
SHC3Q92529 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.92■■□□□ 1.42
SHC3Q92529 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.92■■□□□ 1.42
SHC3Q92529 LINC01529-204ENST00000636474 1715 ntBASIC23.92■■□□□ 1.42
SHC3Q92529 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.92■■□□□ 1.42
SHC3Q92529 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.92■■□□□ 1.42
SHC3Q92529 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHC3Q92529 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHC3Q92529 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHC3Q92529 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.91■■□□□ 1.42
SHC3Q92529 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.91■■□□□ 1.42
SHC3Q92529 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.91■■□□□ 1.42
SHC3Q92529 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SHC3Q92529 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.91■■□□□ 1.42
SHC3Q92529 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.91■■□□□ 1.42
SHC3Q92529 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.91■■□□□ 1.42
SHC3Q92529 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.91■■□□□ 1.42
SHC3Q92529 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.9■■□□□ 1.42
SHC3Q92529 C17orf82-201ENST00000623772 1530 ntBASIC23.9■■□□□ 1.42
SHC3Q92529 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHC3Q92529 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.9■■□□□ 1.42
SHC3Q92529 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.9■■□□□ 1.42
SHC3Q92529 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SHC3Q92529 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHC3Q92529 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SHC3Q92529 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHC3Q92529 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SHC3Q92529 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHC3Q92529 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SHC3Q92529 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms