Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 YBX1P1-201ENST00000445822 960 ntBASIC21.02■□□□□ 0.96
CT55Q8WUE5 AC010525.1-201ENST00000585559 441 ntBASIC21.02■□□□□ 0.96
CT55Q8WUE5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.02■□□□□ 0.96
CT55Q8WUE5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CT55Q8WUE5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CT55Q8WUE5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CT55Q8WUE5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
CT55Q8WUE5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.01■□□□□ 0.95
CT55Q8WUE5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.01■□□□□ 0.95
CT55Q8WUE5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CT55Q8WUE5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CT55Q8WUE5 AC034268.1-201ENST00000441047 882 ntBASIC21.01■□□□□ 0.95
CT55Q8WUE5 DUX4L4-201ENST00000566884 1269 ntBASIC21.01■□□□□ 0.95
CT55Q8WUE5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CT55Q8WUE5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.01■□□□□ 0.95
CT55Q8WUE5 AL031602.1-201ENST00000633169 911 ntBASIC21.01■□□□□ 0.95
CT55Q8WUE5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CT55Q8WUE5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CT55Q8WUE5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.01■□□□□ 0.95
CT55Q8WUE5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CT55Q8WUE5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21■□□□□ 0.95
CT55Q8WUE5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21■□□□□ 0.95
CT55Q8WUE5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21■□□□□ 0.95
CT55Q8WUE5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CT55Q8WUE5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21■□□□□ 0.95
CT55Q8WUE5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CT55Q8WUE5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21■□□□□ 0.95
CT55Q8WUE5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CT55Q8WUE5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CT55Q8WUE5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CT55Q8WUE5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CT55Q8WUE5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
CT55Q8WUE5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CT55Q8WUE5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CT55Q8WUE5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.99■□□□□ 0.95
CT55Q8WUE5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CT55Q8WUE5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.99■□□□□ 0.95
CT55Q8WUE5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CT55Q8WUE5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.99■□□□□ 0.95
CT55Q8WUE5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.99■□□□□ 0.95
CT55Q8WUE5 MIR6084-201ENST00000622012 110 ntBASIC20.99■□□□□ 0.95
CT55Q8WUE5 AL358852.1-201ENST00000623174 1268 ntBASIC20.99■□□□□ 0.95
CT55Q8WUE5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CT55Q8WUE5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CT55Q8WUE5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.99■□□□□ 0.95
CT55Q8WUE5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CT55Q8WUE5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CT55Q8WUE5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CT55Q8WUE5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CT55Q8WUE5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CT55Q8WUE5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CT55Q8WUE5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CT55Q8WUE5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CT55Q8WUE5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CT55Q8WUE5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CT55Q8WUE5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CT55Q8WUE5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.98■□□□□ 0.95
CT55Q8WUE5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CT55Q8WUE5 MIR572-201ENST00000384983 95 ntBASIC20.98■□□□□ 0.95
CT55Q8WUE5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CT55Q8WUE5 OR2I1P-207ENST00000453522 948 ntBASIC20.98■□□□□ 0.95
CT55Q8WUE5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.98■□□□□ 0.95
CT55Q8WUE5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CT55Q8WUE5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CT55Q8WUE5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.97■□□□□ 0.95
CT55Q8WUE5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CT55Q8WUE5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
CT55Q8WUE5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CT55Q8WUE5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CT55Q8WUE5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.97■□□□□ 0.95
CT55Q8WUE5 AC012414.1-201ENST00000556676 535 ntBASIC20.97■□□□□ 0.95
CT55Q8WUE5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.97■□□□□ 0.95
CT55Q8WUE5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CT55Q8WUE5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CT55Q8WUE5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CT55Q8WUE5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CT55Q8WUE5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CT55Q8WUE5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CT55Q8WUE5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.96■□□□□ 0.95
CT55Q8WUE5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CT55Q8WUE5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CT55Q8WUE5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.96■□□□□ 0.95
CT55Q8WUE5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.96■□□□□ 0.95
CT55Q8WUE5 AC027612.3-201ENST00000413684 1047 ntBASIC20.96■□□□□ 0.95
CT55Q8WUE5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CT55Q8WUE5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CT55Q8WUE5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CT55Q8WUE5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.96■□□□□ 0.95
CT55Q8WUE5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CT55Q8WUE5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CT55Q8WUE5 AC144652.1-201ENST00000609974 1624 ntBASIC20.96■□□□□ 0.95
CT55Q8WUE5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CT55Q8WUE5 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.95■□□□□ 0.94
CT55Q8WUE5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CT55Q8WUE5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms