Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM1Q86UE6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
LRRTM1Q86UE6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 AC139530.1-201ENST00000575312 1977 ntBASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
LRRTM1Q86UE6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRRTM1Q86UE6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM1Q86UE6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM1Q86UE6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LRRTM1Q86UE6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
LRRTM1Q86UE6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LRRTM1Q86UE6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LRRTM1Q86UE6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
LRRTM1Q86UE6 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM1Q86UE6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM1Q86UE6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRTM1Q86UE6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM1Q86UE6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM1Q86UE6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM1Q86UE6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 AC092053.2-201ENST00000640557 1818 ntBASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM1Q86UE6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRRTM1Q86UE6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms