Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF546Q86UE3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF546Q86UE3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF546Q86UE3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF546Q86UE3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF546Q86UE3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ZNF546Q86UE3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF546Q86UE3 HLA-V-202ENST00000446817 847 ntBASIC18.58■□□□□ 0.56
ZNF546Q86UE3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF546Q86UE3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF546Q86UE3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF546Q86UE3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ZNF546Q86UE3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF546Q86UE3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF546Q86UE3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ZNF546Q86UE3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF546Q86UE3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF546Q86UE3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF546Q86UE3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 AC139530.1-201ENST00000575312 1977 ntBASIC18.54■□□□□ 0.56
ZNF546Q86UE3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF546Q86UE3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF546Q86UE3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF546Q86UE3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF546Q86UE3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms