Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 AC018358.1-201ENST00000631079 1402 ntBASIC11.2□□□□□ -0.62
LINC01554Q52M75 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01554Q52M75 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC01554Q52M75 SUZ12P1-203ENST00000578195 985 ntBASIC11.2□□□□□ -0.62
LINC01554Q52M75 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 AP004609.3-201ENST00000610705 1884 ntBASIC11.2□□□□□ -0.62
LINC01554Q52M75 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01554Q52M75 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC01554Q52M75 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC01554Q52M75 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC01554Q52M75 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01554Q52M75 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01554Q52M75 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01554Q52M75 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LINC01554Q52M75 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC01554Q52M75 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC01554Q52M75 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC01554Q52M75 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC01554Q52M75 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01554Q52M75 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01554Q52M75 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC01554Q52M75 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 PKD1P5-201ENST00000532415 10291 ntBASIC11.18□□□□□ -0.62
LINC01554Q52M75 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 AC026310.3-201ENST00000625186 2373 ntBASIC11.18□□□□□ -0.62
LINC01554Q52M75 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01554Q52M75 AL020996.1-203ENST00000536896 2307 ntBASIC11.18□□□□□ -0.62
LINC01554Q52M75 AL137060.1-201ENST00000618151 2648 ntBASIC11.18□□□□□ -0.62
LINC01554Q52M75 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC01554Q52M75 AL356309.3-201ENST00000624132 1934 ntBASIC11.18□□□□□ -0.62
LINC01554Q52M75 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
LINC01554Q52M75 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01554Q52M75 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC01554Q52M75 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC01554Q52M75 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC01554Q52M75 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01554Q52M75 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 PREB-202ENST00000406567 1910 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01554Q52M75 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01554Q52M75 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01554Q52M75 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01554Q52M75 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms