Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 LCB2YDR062W 1686 nt3.89□□□□□ -1.79
VPS13Q07878 ACK1YDL203C 1872 nt3.89□□□□□ -1.79
VPS13Q07878 CDC28YBR160W 897 nt3.89□□□□□ -1.79
VPS13Q07878 TOG1YER184C 2385 nt3.89□□□□□ -1.79
VPS13Q07878 MCM2YBL023C 2607 nt3.89□□□□□ -1.79
VPS13Q07878 BIK1YCL029C 1323 nt3.89□□□□□ -1.79
VPS13Q07878 MET4YNL103W 2019 nt3.89□□□□□ -1.79
VPS13Q07878 YIL055CYIL055C 1884 nt3.88□□□□□ -1.79
VPS13Q07878 YNR065CYNR065C 3351 nt3.88□□□□□ -1.79
VPS13Q07878 SPT10YJL127C 1923 nt3.88□□□□□ -1.79
VPS13Q07878 CKS1YBR135W 453 nt3.88□□□□□ -1.79
VPS13Q07878 CDC45YLR103C 1953 nt3.88□□□□□ -1.79
VPS13Q07878 CDC48YDL126C 2508 nt3.88□□□□□ -1.79
VPS13Q07878 AXL2YIL140W 2472 nt3.88□□□□□ -1.79
VPS13Q07878 HAT2YEL056W 1206 nt3.88□□□□□ -1.79
VPS13Q07878 NOG2YNR053C 1461 nt3.88□□□□□ -1.79
VPS13Q07878 AAP1YHR047C 2571 nt3.87□□□□□ -1.79
VPS13Q07878 LCB5YLR260W 2064 nt3.87□□□□□ -1.79
VPS13Q07878 SOL4YGR248W 768 nt3.87□□□□□ -1.79
VPS13Q07878 TOS2YGR221C 1869 nt3.86□□□□□ -1.79
VPS13Q07878 HIM1YDR317W 1245 nt3.86□□□□□ -1.79
VPS13Q07878 AUA1YFL010W-A 285 nt3.86□□□□□ -1.79
VPS13Q07878 PBP2YBR233W 1242 nt3.86□□□□□ -1.79
VPS13Q07878 PBN1YCL052C 1251 nt3.86□□□□□ -1.79
VPS13Q07878 SHQ1YIL104C 1524 nt3.86□□□□□ -1.79
VPS13Q07878 VHT1YGR065C 1782 nt3.86□□□□□ -1.79
VPS13Q07878 COA4YLR218C 453 nt3.86□□□□□ -1.79
VPS13Q07878 STE13YOR219C 2796 nt3.86□□□□□ -1.79
VPS13Q07878 CLF1YLR117C 2064 nt3.86□□□□□ -1.79
VPS13Q07878 VPS53YJL029C 2469 nt3.85□□□□□ -1.79
VPS13Q07878 MNN2YBR015C 1794 nt3.85□□□□□ -1.79
VPS13Q07878 RPL15AYLR029C 615 nt3.85□□□□□ -1.79
VPS13Q07878 RIM9YMR063W 720 nt3.85□□□□□ -1.79
VPS13Q07878 IML2YJL082W 2196 nt3.85□□□□□ -1.79
VPS13Q07878 HCA4YJL033W 2313 nt3.85□□□□□ -1.79
VPS13Q07878 MEC3YLR288C 1425 nt3.85□□□□□ -1.79
VPS13Q07878 YCL075WYCL075W 441 nt3.85□□□□□ -1.79
VPS13Q07878 YPP1YGR198W 2454 nt3.85□□□□□ -1.79
VPS13Q07878 URA3YEL021W 804 nt3.84□□□□□ -1.79
VPS13Q07878 COQ5YML110C 924 nt3.84□□□□□ -1.79
VPS13Q07878 FMP41YNL168C 780 nt3.84□□□□□ -1.79
VPS13Q07878 HOYDL227C 1761 nt3.84□□□□□ -1.79
VPS13Q07878 RRN7YJL025W 1545 nt3.84□□□□□ -1.79
VPS13Q07878 TPO2YGR138C 1845 nt3.84□□□□□ -1.79
VPS13Q07878 tV(CAC)DtV(CAC)D 73 nt3.84□□□□□ -1.79
VPS13Q07878 tV(CAC)HtV(CAC)H 73 nt3.84□□□□□ -1.79
VPS13Q07878 RFC3YNL290W 1023 nt3.84□□□□□ -1.79
VPS13Q07878 URA7YBL039C 1740 nt3.84□□□□□ -1.79
VPS13Q07878 THI7YLR237W 1797 nt3.84□□□□□ -1.8
VPS13Q07878 BNA1YJR025C 534 nt3.84□□□□□ -1.8
VPS13Q07878 MEK1YOR351C 1494 nt3.83□□□□□ -1.8
VPS13Q07878 ATG26YLR189C 3597 nt3.83□□□□□ -1.8
VPS13Q07878 YGR107WYGR107W 450 nt3.83□□□□□ -1.8
VPS13Q07878 YBL036CYBL036C 774 nt3.83□□□□□ -1.8
VPS13Q07878 PDR15YDR406W 4590 nt3.83□□□□□ -1.8
VPS13Q07878 STE6YKL209C 3873 nt3.83□□□□□ -1.8
VPS13Q07878 USB1YLR132C 873 nt3.83□□□□□ -1.8
VPS13Q07878 DBP9YLR276C 1785 nt3.82□□□□□ -1.8
VPS13Q07878 YFR035CYFR035C 345 nt3.82□□□□□ -1.8
VPS13Q07878 NCR1YPL006W 3513 nt3.82□□□□□ -1.8
VPS13Q07878 YTA7YGR270W 4140 nt3.82□□□□□ -1.8
VPS13Q07878 CNL1YDR357C 369 nt3.82□□□□□ -1.8
VPS13Q07878 MRP13YGR084C 1020 nt3.82□□□□□ -1.8
VPS13Q07878 BNA5YLR231C 1362 nt3.81□□□□□ -1.8
VPS13Q07878 tF(GAA)DtF(GAA)D 73 nt3.81□□□□□ -1.8
VPS13Q07878 tF(GAA)NtF(GAA)N 73 nt3.81□□□□□ -1.8
VPS13Q07878 PHA2YNL316C 1005 nt3.81□□□□□ -1.8
VPS13Q07878 SRB6YBR253W 366 nt3.81□□□□□ -1.8
VPS13Q07878 DUG1YFR044C 1446 nt3.81□□□□□ -1.8
VPS13Q07878 RNA15YGL044C 891 nt3.81□□□□□ -1.8
VPS13Q07878 NUP2YLR335W 2163 nt3.81□□□□□ -1.8
VPS13Q07878 YJR128WYJR128W 360 nt3.8□□□□□ -1.8
VPS13Q07878 SRP72YPL210C 1923 nt3.8□□□□□ -1.8
VPS13Q07878 SOF1YLL011W 1470 nt3.8□□□□□ -1.8
VPS13Q07878 MSR1YHR091C 1932 nt3.8□□□□□ -1.8
VPS13Q07878 PAL1YDR348C 1500 nt3.8□□□□□ -1.8
VPS13Q07878 YJL175WYJL175W 513 nt3.79□□□□□ -1.8
VPS13Q07878 NOC4YPR144C 1659 nt3.79□□□□□ -1.8
VPS13Q07878 FRE3YOR381W 2136 nt3.79□□□□□ -1.8
VPS13Q07878 SKG6YHR149C 2205 nt3.79□□□□□ -1.8
VPS13Q07878 MET7YOR241W 1647 nt3.79□□□□□ -1.8
VPS13Q07878 LSM12YHR121W 564 nt3.79□□□□□ -1.8
VPS13Q07878 YOR283WYOR283W 693 nt3.78□□□□□ -1.8
VPS13Q07878 HXT6YDR343C 1713 nt3.78□□□□□ -1.8
VPS13Q07878 ECM16YMR128W 3804 nt3.78□□□□□ -1.8
VPS13Q07878 COX14YML129C 213 nt3.78□□□□□ -1.8
VPS13Q07878 AIM17YHL021C 1398 nt3.78□□□□□ -1.81
VPS13Q07878 RAD54YGL163C 2697 nt3.77□□□□□ -1.81
VPS13Q07878 VHS3YOR054C 2025 nt3.77□□□□□ -1.81
VPS13Q07878 TRM8YDL201W 861 nt3.77□□□□□ -1.81
VPS13Q07878 YHR112CYHR112C 1137 nt3.77□□□□□ -1.81
VPS13Q07878 HXT7YDR342C 1713 nt3.77□□□□□ -1.81
VPS13Q07878 GAC1YOR178C 2382 nt3.77□□□□□ -1.81
VPS13Q07878 BOP2YLR267W 1713 nt3.77□□□□□ -1.81
VPS13Q07878 ELF1YKL160W 438 nt3.77□□□□□ -1.81
VPS13Q07878 SSE2YBR169C 2082 nt3.76□□□□□ -1.81
VPS13Q07878 CLA4YNL298W 2529 nt3.76□□□□□ -1.81
VPS13Q07878 MRPL16YBL038W 699 nt3.76□□□□□ -1.81
VPS13Q07878 RPA43YOR340C 981 nt3.76□□□□□ -1.81
VPS13Q07878 PMC1YGL006W 3522 nt3.75□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms