Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TFF3Q07654 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TFF3Q07654 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TFF3Q07654 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TFF3Q07654 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TFF3Q07654 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.75■□□□□ 0.75
TFF3Q07654 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.75■□□□□ 0.75
TFF3Q07654 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.75■□□□□ 0.75
TFF3Q07654 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TFF3Q07654 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.75■□□□□ 0.75
TFF3Q07654 HLA-L-211ENST00000482052 1765 ntBASIC19.75■□□□□ 0.75
TFF3Q07654 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.75■□□□□ 0.75
TFF3Q07654 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TFF3Q07654 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TFF3Q07654 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF3Q07654 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.74■□□□□ 0.75
TFF3Q07654 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF3Q07654 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
TFF3Q07654 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF3Q07654 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF3Q07654 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF3Q07654 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
TFF3Q07654 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF3Q07654 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.74■□□□□ 0.75
TFF3Q07654 IGHV3-19-201ENST00000521488 291 ntBASIC19.74■□□□□ 0.75
TFF3Q07654 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.74■□□□□ 0.75
TFF3Q07654 ALDH1A3-203ENST00000557963 1670 ntBASIC19.74■□□□□ 0.75
TFF3Q07654 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF3Q07654 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF3Q07654 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
TFF3Q07654 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TFF3Q07654 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TFF3Q07654 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TFF3Q07654 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.73■□□□□ 0.75
TFF3Q07654 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TFF3Q07654 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TFF3Q07654 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TFF3Q07654 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TFF3Q07654 MIR572-201ENST00000384983 95 ntBASIC19.72■□□□□ 0.75
TFF3Q07654 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.72■□□□□ 0.75
TFF3Q07654 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.72■□□□□ 0.75
TFF3Q07654 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TFF3Q07654 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TFF3Q07654 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TFF3Q07654 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TFF3Q07654 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TFF3Q07654 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TFF3Q07654 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.71■□□□□ 0.75
TFF3Q07654 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TFF3Q07654 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TFF3Q07654 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TFF3Q07654 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.71■□□□□ 0.75
TFF3Q07654 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TFF3Q07654 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TFF3Q07654 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.71■□□□□ 0.75
TFF3Q07654 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.71■□□□□ 0.75
TFF3Q07654 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.71■□□□□ 0.75
TFF3Q07654 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TFF3Q07654 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TFF3Q07654 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.71■□□□□ 0.75
TFF3Q07654 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TFF3Q07654 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TFF3Q07654 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF3Q07654 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.7■□□□□ 0.74
TFF3Q07654 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.7■□□□□ 0.74
TFF3Q07654 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TFF3Q07654 AC012414.1-201ENST00000556676 535 ntBASIC19.7■□□□□ 0.74
TFF3Q07654 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TFF3Q07654 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TFF3Q07654 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.7■□□□□ 0.74
TFF3Q07654 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF3Q07654 AC093323.1-202ENST00000635031 2045 ntBASIC19.69■□□□□ 0.74
TFF3Q07654 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TFF3Q07654 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.69■□□□□ 0.74
TFF3Q07654 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF3Q07654 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TFF3Q07654 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TFF3Q07654 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.69■□□□□ 0.74
TFF3Q07654 AL354811.1-201ENST00000610286 706 ntBASIC19.69■□□□□ 0.74
TFF3Q07654 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.69■□□□□ 0.74
TFF3Q07654 MIR6084-201ENST00000622012 110 ntBASIC19.69■□□□□ 0.74
TFF3Q07654 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF3Q07654 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.69■□□□□ 0.74
TFF3Q07654 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.69■□□□□ 0.74
TFF3Q07654 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TFF3Q07654 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.69■□□□□ 0.74
TFF3Q07654 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TFF3Q07654 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TFF3Q07654 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.69■□□□□ 0.74
TFF3Q07654 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TFF3Q07654 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TFF3Q07654 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TFF3Q07654 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.68■□□□□ 0.74
TFF3Q07654 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.68■□□□□ 0.74
TFF3Q07654 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.68■□□□□ 0.74
TFF3Q07654 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.68■□□□□ 0.74
TFF3Q07654 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TFF3Q07654 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.68■□□□□ 0.74
TFF3Q07654 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TFF3Q07654 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms