Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 RPS15YOL040C 429 nt5.95□□□□□ -1.46 RIP-Chip
UBP3Q01477 JID1YPR061C 906 nt5.95□□□□□ -1.46
UBP3Q01477 GRX1YCL035C 333 nt5.95□□□□□ -1.46
UBP3Q01477 TNA1YGR260W 1605 nt5.95□□□□□ -1.46
UBP3Q01477 MAL11YGR289C 1851 nt5.94□□□□□ -1.46
UBP3Q01477 PIF1YML061C 2580 nt5.94□□□□□ -1.46
UBP3Q01477 TRM8YDL201W 861 nt5.94□□□□□ -1.46 RIP-Chip
UBP3Q01477 RAV2YDR202C 1056 nt5.94□□□□□ -1.46 RIP-Chip
UBP3Q01477 YDR290WYDR290W 330 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)CtN(GUU)C 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)FtN(GUU)F 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)GtN(GUU)G 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)KtN(GUU)K 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)LtN(GUU)L 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)N1tN(GUU)N1 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)N2tN(GUU)N2 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)O1tN(GUU)O1 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)O2tN(GUU)O2 74 nt5.94□□□□□ -1.46
UBP3Q01477 tN(GUU)PtN(GUU)P 74 nt5.94□□□□□ -1.46
UBP3Q01477 CBP4YGR174C 513 nt5.94□□□□□ -1.46
UBP3Q01477 YHR069C-AYHR069C-A 363 nt5.94□□□□□ -1.46
UBP3Q01477 SYN8YAL014C 768 nt5.94□□□□□ -1.46
UBP3Q01477 YLR194CYLR194C 765 nt5.94□□□□□ -1.46 RIP-Chip
UBP3Q01477 YLR379WYLR379W 375 nt5.94□□□□□ -1.46
UBP3Q01477 PGA3YML125C 939 nt5.94□□□□□ -1.46
UBP3Q01477 SPO19YPL130W 672 nt5.94□□□□□ -1.46 RIP-Chip
UBP3Q01477 SUE1YPR151C 621 nt5.94□□□□□ -1.46
UBP3Q01477 MRPL37YBR268W 318 nt5.94□□□□□ -1.46
UBP3Q01477 ENT2YLR206W 1842 nt5.94□□□□□ -1.46 RIP-Chip
UBP3Q01477 PCI8YIL071C 1335 nt5.94□□□□□ -1.46
UBP3Q01477 SHE10YGL228W 1734 nt5.94□□□□□ -1.46
UBP3Q01477 TYR1YBR166C 1359 nt5.93□□□□□ -1.46 RIP-Chip
UBP3Q01477 CPR1YDR155C 489 nt5.93□□□□□ -1.46
UBP3Q01477 RML2YEL050C 1182 nt5.93□□□□□ -1.46
UBP3Q01477 DDI2YFL061W 678 nt5.93□□□□□ -1.46
UBP3Q01477 MRPS35YGR165W 1038 nt5.93□□□□□ -1.46 RIP-Chip
UBP3Q01477 HOT13YKL084W 351 nt5.93□□□□□ -1.46
UBP3Q01477 YLR317WYLR317W 435 nt5.93□□□□□ -1.46
UBP3Q01477 DDI3YNL335W 678 nt5.93□□□□□ -1.46 RIP-Chip
UBP3Q01477 YBR013CYBR013C 390 nt5.93□□□□□ -1.46
UBP3Q01477 YPR142CYPR142C 564 nt5.93□□□□□ -1.46
UBP3Q01477 LDH1YBR204C 1128 nt5.93□□□□□ -1.46 RIP-Chip
UBP3Q01477 ARO4YBR249C 1113 nt5.93□□□□□ -1.46
UBP3Q01477 VPS1YKR001C 2115 nt5.93□□□□□ -1.46
UBP3Q01477 KTR7YIL085C 1554 nt5.93□□□□□ -1.46
UBP3Q01477 TRM13YOL125W 1431 nt5.92□□□□□ -1.46
UBP3Q01477 MSS2YDL107W 1056 nt5.92□□□□□ -1.46
UBP3Q01477 USB1YLR132C 873 nt5.92□□□□□ -1.46
UBP3Q01477 SEC72YLR292C 582 nt5.92□□□□□ -1.46
UBP3Q01477 CNS1YBR155W 1158 nt5.92□□□□□ -1.46
UBP3Q01477 STE50YCL032W 1041 nt5.92□□□□□ -1.46
UBP3Q01477 TRK2YKR050W 2670 nt5.92□□□□□ -1.46 RIP-Chip
UBP3Q01477 ESF1YDR365C 1887 nt5.92□□□□□ -1.46
UBP3Q01477 SAP155YFR040W 3009 nt5.91□□□□□ -1.46
UBP3Q01477 SLM5YCR024C 1479 nt5.91□□□□□ -1.46
UBP3Q01477 SUM1YDR310C 3189 nt5.91□□□□□ -1.46
UBP3Q01477 KNH1YDL049C 807 nt5.91□□□□□ -1.46
UBP3Q01477 COX26YDR119W-A 201 nt5.91□□□□□ -1.46
UBP3Q01477 IST3YIR005W 447 nt5.91□□□□□ -1.46
UBP3Q01477 PSF2YJL072C 642 nt5.91□□□□□ -1.46
UBP3Q01477 COS9YKL219W 1224 nt5.91□□□□□ -1.46
UBP3Q01477 YKL223WYKL223W 333 nt5.91□□□□□ -1.46
UBP3Q01477 MRPS17YMR188C 714 nt5.91□□□□□ -1.46
UBP3Q01477 YOL118CYOL118C 309 nt5.91□□□□□ -1.46
UBP3Q01477 CMR3YPR013C 954 nt5.91□□□□□ -1.46 RIP-Chip
UBP3Q01477 VHS2YIL135C 1311 nt5.91□□□□□ -1.46
UBP3Q01477 MKS1YNL076W 1755 nt5.9□□□□□ -1.46 RIP-Chip
UBP3Q01477 TAX4YJL083W 1815 nt5.9□□□□□ -1.46
UBP3Q01477 STR2YJR130C 1920 nt5.9□□□□□ -1.46
UBP3Q01477 YDL034WYDL034W 345 nt5.9□□□□□ -1.46
UBP3Q01477 YDL162CYDL162C 357 nt5.9□□□□□ -1.46
UBP3Q01477 MTQ2YDR140W 666 nt5.9□□□□□ -1.46 RIP-Chip
UBP3Q01477 HTB1YDR224C 396 nt5.9□□□□□ -1.46
UBP3Q01477 BI2Q0110 1272 nt5.9□□□□□ -1.46
UBP3Q01477 HSX1tR(CCU)J 72 nt5.9□□□□□ -1.46
UBP3Q01477 TTI2YJR136C 1266 nt5.9□□□□□ -1.46
UBP3Q01477 SDS22YKL193C 1017 nt5.9□□□□□ -1.46
UBP3Q01477 RUF20RUF20 443 nt5.9□□□□□ -1.46
UBP3Q01477 RSC30YHR056C 2652 nt5.9□□□□□ -1.47
UBP3Q01477 RIM101YHL027W 1878 nt5.9□□□□□ -1.47 RIP-Chip
UBP3Q01477 PHO90YJL198W 2646 nt5.89□□□□□ -1.47 RIP-Chip
UBP3Q01477 PLP1YDR183W 693 nt5.89□□□□□ -1.47
UBP3Q01477 YAP6YDR259C 1152 nt5.89□□□□□ -1.47
UBP3Q01477 YFR052C-AYFR052C-A 306 nt5.89□□□□□ -1.47
UBP3Q01477 MRPL49YJL096W 486 nt5.89□□□□□ -1.47
UBP3Q01477 MTC2YKL098W 1074 nt5.89□□□□□ -1.47
UBP3Q01477 YKL202WYKL202W 582 nt5.89□□□□□ -1.47
UBP3Q01477 MMM1YLL006W 1281 nt5.89□□□□□ -1.47
UBP3Q01477 GPN3YLR243W 819 nt5.89□□□□□ -1.47
UBP3Q01477 YBL068W-AYBL068W-A 237 nt5.89□□□□□ -1.47
UBP3Q01477 AIF1YNR074C 1137 nt5.89□□□□□ -1.47 RIP-Chip
UBP3Q01477 RAS1YOR101W 930 nt5.89□□□□□ -1.47
UBP3Q01477 YOR152CYOR152C 771 nt5.89□□□□□ -1.47
UBP3Q01477 SIA1YOR137C 1869 nt5.89□□□□□ -1.47
UBP3Q01477 LAP3YNL239W 1365 nt5.89□□□□□ -1.47
UBP3Q01477 BAP2YBR068C 1830 nt5.88□□□□□ -1.47
UBP3Q01477 YFR045WYFR045W 930 nt5.88□□□□□ -1.47
UBP3Q01477 YGL230CYGL230C 444 nt5.88□□□□□ -1.47
UBP3Q01477 EFM4YIL064W 774 nt5.88□□□□□ -1.47 RIP-Chip
UBP3Q01477 SMD2YLR275W 333 nt5.88□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms