Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPP38P78345 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.11■□□□□ 0.97
RPP38P78345 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPP38P78345 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.11■□□□□ 0.97
RPP38P78345 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.1■□□□□ 0.97
RPP38P78345 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RPP38P78345 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.1■□□□□ 0.97
RPP38P78345 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RPP38P78345 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPP38P78345 MIR6724-1-201ENST00000616420 92 ntBASIC21.1■□□□□ 0.97
RPP38P78345 MIR6724-2-201ENST00000616483 92 ntBASIC21.1■□□□□ 0.97
RPP38P78345 MIR6724-4-201ENST00000617390 92 ntBASIC21.1■□□□□ 0.97
RPP38P78345 MIR6724-3-201ENST00000622482 92 ntBASIC21.1■□□□□ 0.97
RPP38P78345 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPP38P78345 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPP38P78345 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RPP38P78345 AC131274.2-201ENST00000580697 1507 ntBASIC21.09■□□□□ 0.97
RPP38P78345 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RPP38P78345 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP38P78345 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPP38P78345 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.09■□□□□ 0.97
RPP38P78345 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.09■□□□□ 0.97
RPP38P78345 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RPP38P78345 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP38P78345 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.09■□□□□ 0.97
RPP38P78345 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP38P78345 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPP38P78345 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPP38P78345 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.08■□□□□ 0.97
RPP38P78345 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.08■□□□□ 0.97
RPP38P78345 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RPP38P78345 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.08■□□□□ 0.97
RPP38P78345 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RPP38P78345 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPP38P78345 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RPP38P78345 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.08■□□□□ 0.97
RPP38P78345 LINC00565-201ENST00000562710 2331 ntBASIC21.08■□□□□ 0.97
RPP38P78345 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.08■□□□□ 0.97
RPP38P78345 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.08■□□□□ 0.97
RPP38P78345 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPP38P78345 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPP38P78345 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.08■□□□□ 0.96
RPP38P78345 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPP38P78345 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.07■□□□□ 0.96
RPP38P78345 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.07■□□□□ 0.96
RPP38P78345 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP38P78345 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP38P78345 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP38P78345 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP38P78345 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP38P78345 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.06■□□□□ 0.96
RPP38P78345 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP38P78345 ANOS2P-203ENST00000472227 1816 ntBASIC21.06■□□□□ 0.96
RPP38P78345 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP38P78345 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP38P78345 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.06■□□□□ 0.96
RPP38P78345 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.06■□□□□ 0.96
RPP38P78345 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.06■□□□□ 0.96
RPP38P78345 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.06■□□□□ 0.96
RPP38P78345 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP38P78345 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RPP38P78345 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP38P78345 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPP38P78345 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RPP38P78345 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.05■□□□□ 0.96
RPP38P78345 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP38P78345 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.05■□□□□ 0.96
RPP38P78345 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.05■□□□□ 0.96
RPP38P78345 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP38P78345 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP38P78345 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.05■□□□□ 0.96
RPP38P78345 AC131212.1-201ENST00000613771 668 ntBASIC21.05■□□□□ 0.96
RPP38P78345 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP38P78345 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPP38P78345 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.05■□□□□ 0.96
RPP38P78345 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.04■□□□□ 0.96
RPP38P78345 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPP38P78345 AC005703.6-201ENST00000623265 1329 ntBASIC21.04■□□□□ 0.96
RPP38P78345 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPP38P78345 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPP38P78345 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RPP38P78345 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RPP38P78345 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.03■□□□□ 0.96
RPP38P78345 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.03■□□□□ 0.96
RPP38P78345 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPP38P78345 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPP38P78345 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.03■□□□□ 0.96
RPP38P78345 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPP38P78345 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.03■□□□□ 0.96
RPP38P78345 AL356740.2-201ENST00000601559 647 ntBASIC21.03■□□□□ 0.96
RPP38P78345 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RPP38P78345 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms