Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 tK(CUU)E2tK(CUU)E2 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)FtK(CUU)F 73 nt3.83□□□□□ -1.8
SSU72P53538 UBC6YER100W 753 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)G1tK(CUU)G1 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)G2tK(CUU)G2 73 nt3.83□□□□□ -1.8
SSU72P53538 SLX8YER116C 825 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)G3tK(CUU)G3 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)ItK(CUU)I 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)JtK(CUU)J 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)KtK(CUU)K 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)MtK(CUU)M 73 nt3.83□□□□□ -1.8
SSU72P53538 tK(CUU)PtK(CUU)P 73 nt3.83□□□□□ -1.8
SSU72P53538 YLR036CYLR036C 612 nt3.83□□□□□ -1.8
SSU72P53538 YPR059CYPR059C 387 nt3.83□□□□□ -1.8
SSU72P53538 RVB1YDR190C 1392 nt3.83□□□□□ -1.8
SSU72P53538 MSN4YKL062W 1893 nt3.83□□□□□ -1.8
SSU72P53538 SKG3YLR187W 3081 nt3.82□□□□□ -1.8
SSU72P53538 LAP2YNL045W 2016 nt3.82□□□□□ -1.8
SSU72P53538 VPS45YGL095C 1734 nt3.82□□□□□ -1.8
SSU72P53538 RPS11AYDR025W 471 nt3.82□□□□□ -1.8
SSU72P53538 FMP10YER182W 735 nt3.82□□□□□ -1.8
SSU72P53538 BIO2YGR286C 1128 nt3.82□□□□□ -1.8
SSU72P53538 YJL218WYJL218W 591 nt3.82□□□□□ -1.8
SSU72P53538 PAM18YLR008C 507 nt3.82□□□□□ -1.8
SSU72P53538 BUD17YNR027W 954 nt3.82□□□□□ -1.8
SSU72P53538 STV1YMR054W 2673 nt3.81□□□□□ -1.8
SSU72P53538 EUG1YDR518W 1554 nt3.81□□□□□ -1.8
SSU72P53538 TAF5YBR198C 2397 nt3.81□□□□□ -1.8
SSU72P53538 CLB4YLR210W 1383 nt3.81□□□□□ -1.8
SSU72P53538 YER067C-AYER067C-A 324 nt3.81□□□□□ -1.8
SSU72P53538 GPP1YIL053W 753 nt3.81□□□□□ -1.8
SSU72P53538 PEX22YAL055W 543 nt3.81□□□□□ -1.8
SSU72P53538 YBL006W-AYBL006W-A 150 nt3.81□□□□□ -1.8
SSU72P53538 RPC19YNL113W 429 nt3.81□□□□□ -1.8
SSU72P53538 INA17YPL099C 549 nt3.81□□□□□ -1.8
SSU72P53538 YBR103C-AYBR103C-A 144 nt3.81□□□□□ -1.8
SSU72P53538 VID28YIL017C 2766 nt3.81□□□□□ -1.8
SSU72P53538 NAM2YLR382C 2685 nt3.81□□□□□ -1.8
SSU72P53538 CDC9YDL164C 2268 nt3.81□□□□□ -1.8
SSU72P53538 EKI1YDR147W 1605 nt3.81□□□□□ -1.8
SSU72P53538 DRN1YGR093W 1524 nt3.8□□□□□ -1.8
SSU72P53538 SUP35YDR172W 2058 nt3.8□□□□□ -1.8
SSU72P53538 SWP82YFL049W 1872 nt3.8□□□□□ -1.8
SSU72P53538 YDR445CYDR445C 408 nt3.8□□□□□ -1.8
SSU72P53538 VPS29YHR012W 849 nt3.8□□□□□ -1.8
SSU72P53538 PML1YLR016C 615 nt3.8□□□□□ -1.8
SSU72P53538 IDH2YOR136W 1110 nt3.8□□□□□ -1.8
SSU72P53538 YAR1YPL239W 603 nt3.8□□□□□ -1.8
SSU72P53538 YAP1802YGR241C 1707 nt3.79□□□□□ -1.8
SSU72P53538 GCD1YOR260W 1737 nt3.79□□□□□ -1.8
SSU72P53538 VHS3YOR054C 2025 nt3.79□□□□□ -1.8
SSU72P53538 TOG1YER184C 2385 nt3.79□□□□□ -1.8
SSU72P53538 RAM1YDL090C 1296 nt3.79□□□□□ -1.8
SSU72P53538 DIN7YDR263C 1293 nt3.79□□□□□ -1.8
SSU72P53538 YDR545C-AYDR545C-A 480 nt3.79□□□□□ -1.8
SSU72P53538 YEL077W-AYEL077W-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YER190C-BYER190C-B 483 nt3.79□□□□□ -1.8
SSU72P53538 YFL068WYFL068W 483 nt3.79□□□□□ -1.8
SSU72P53538 YGR296C-BYGR296C-B 483 nt3.79□□□□□ -1.8
SSU72P53538 YHL050W-AYHL050W-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YHR219C-AYHR219C-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YIL177W-AYIL177W-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YJL225W-AYJL225W-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YLL066W-AYLL066W-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YLL067W-AYLL067W-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YAR019W-AYAR019W-A 333 nt3.79□□□□□ -1.8
SSU72P53538 YLR466C-AYLR466C-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YLR467C-AYLR467C-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YML133W-BYML133W-B 483 nt3.79□□□□□ -1.8
SSU72P53538 YNL339W-BYNL339W-B 483 nt3.79□□□□□ -1.8
SSU72P53538 YBL113W-AYBL113W-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YNG1YOR064C 660 nt3.79□□□□□ -1.8
SSU72P53538 YOR396C-AYOR396C-A 483 nt3.79□□□□□ -1.8
SSU72P53538 YPL283W-BYPL283W-B 483 nt3.79□□□□□ -1.8
SSU72P53538 HSP26YBR072W 645 nt3.79□□□□□ -1.8
SSU72P53538 YPR169W-AYPR169W-A 219 nt3.79□□□□□ -1.8
SSU72P53538 YPR170W-BYPR170W-B 258 nt3.79□□□□□ -1.8
SSU72P53538 YPR204C-AYPR204C-A 483 nt3.79□□□□□ -1.8
SSU72P53538 KGD1YIL125W 3045 nt3.79□□□□□ -1.8
SSU72P53538 RAD28YDR030C 1521 nt3.79□□□□□ -1.8
SSU72P53538 PEP7YDR323C 1548 nt3.79□□□□□ -1.8
SSU72P53538 APC4YDR118W 1959 nt3.78□□□□□ -1.8
SSU72P53538 MET17YLR303W 1335 nt3.78□□□□□ -1.8
SSU72P53538 MCD4YKL165C 2760 nt3.78□□□□□ -1.8
SSU72P53538 PRP11YDL043C 801 nt3.78□□□□□ -1.8
SSU72P53538 PIR3YKL163W 978 nt3.78□□□□□ -1.8
SSU72P53538 MMM1YLL006W 1281 nt3.78□□□□□ -1.8
SSU72P53538 RPS0BYLR048W 759 nt3.78□□□□□ -1.8
SSU72P53538 APS1YLR170C 471 nt3.78□□□□□ -1.8
SSU72P53538 YLR283WYLR283W 945 nt3.78□□□□□ -1.8
SSU72P53538 AIF1YNR074C 1137 nt3.78□□□□□ -1.8
SSU72P53538 HEM15YOR176W 1182 nt3.78□□□□□ -1.8
SSU72P53538 MMR1YLR190W 1476 nt3.78□□□□□ -1.8
SSU72P53538 KRE29YER038C 1395 nt3.77□□□□□ -1.81
SSU72P53538 ATG32YIL146C 1590 nt3.77□□□□□ -1.81
SSU72P53538 RPO31YOR116C 4383 nt3.77□□□□□ -1.81
SSU72P53538 APL4YPR029C 2499 nt3.77□□□□□ -1.81
SSU72P53538 CPR4YCR069W 957 nt3.77□□□□□ -1.81
SSU72P53538 YGR011WYGR011W 327 nt3.77□□□□□ -1.81
SSU72P53538 RRT7YLL030C 342 nt3.77□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms