Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14□□□□□ -0.172e-6■■■■□ 23.3
NCBP2P52298 Z98749.2-204ENST00000443042 579 ntTSL 413.82□□□□□ -0.22e-6■■■■□ 23.3
NCBP2P52298 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.52□□□□□ -0.252e-6■■■■□ 23.3
NCBP2P52298 Z98749.2-205ENST00000457665 974 ntTSL 213.3□□□□□ -0.282e-6■■■■□ 23.3
NCBP2P52298 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.182e-6■■■■□ 23.3
NCBP2P52298 KPNA6-204ENST00000471599 3941 ntTSL 26.83□□□□□ -1.322e-6■■■■□ 23.3
NCBP2P52298 DLG1-204ENST00000392381 2833 ntTSL 1 (best)20.12■□□□□ 0.814e-12■■■■□ 23.2
NCBP2P52298 DLG1-207ENST00000419227 1771 ntTSL 213.95□□□□□ -0.184e-12■■■■□ 23.2
NCBP2P52298 DLG1-209ENST00000419553 582 ntTSL 211.26□□□□□ -0.614e-12■■■■□ 23.2
NCBP2P52298 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.744e-12■■■■□ 23.2
NCBP2P52298 DLG1-215ENST00000448528 2977 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.744e-12■■■■□ 23.2
NCBP2P52298 DLG1-205ENST00000392382 2690 ntTSL 5 BASIC9.93□□□□□ -0.824e-12■■■■□ 23.2
NCBP2P52298 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.044e-12■■■■□ 23.2
NCBP2P52298 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.084e-12■■■■□ 23.2
NCBP2P52298 DLG1-223ENST00000471733 2605 ntTSL 1 (best)6.56□□□□□ -1.364e-12■■■■□ 23.2
NCBP2P52298 FAM13A-203ENST00000502459 1993 ntTSL 216.55■□□□□ 0.241e-8■■■■□ 23.2
NCBP2P52298 FAM13A-220ENST00000513837 2590 ntTSL 2 BASIC9.4□□□□□ -0.91e-8■■■■□ 23.2
NCBP2P52298 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC9.14□□□□□ -0.951e-8■■■■□ 23.2
NCBP2P52298 FAM13A-207ENST00000504836 2287 ntTSL 28.95□□□□□ -0.981e-8■■■■□ 23.2
NCBP2P52298 FAM13A-210ENST00000507352 1306 ntTSL 1 (best)8.53□□□□□ -1.041e-8■■■■□ 23.2
NCBP2P52298 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.37□□□□□ -1.071e-8■■■■□ 23.2
NCBP2P52298 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.111e-8■■■■□ 23.2
NCBP2P52298 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.62□□□□□ -1.191e-8■■■■□ 23.2
NCBP2P52298 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.28□□□□□ -1.241e-8■■■■□ 23.2
NCBP2P52298 CDC16-210ENST00000494766 1003 ntTSL 217.81■□□□□ 0.446e-13■■■■□ 23.2
NCBP2P52298 CDC16-201ENST00000252457 2034 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.866e-13■■■■□ 23.2
NCBP2P52298 CDC16-205ENST00000375308 2034 ntTSL 1 (best) BASIC9.65□□□□□ -0.866e-13■■■■□ 23.2
NCBP2P52298 MITD1-205ENST00000438121 999 ntTSL 1 (best)10.99□□□□□ -0.652e-11■■■■□ 23.2
NCBP2P52298 MITD1-202ENST00000409107 662 ntTSL 38.67□□□□□ -1.022e-11■■■■□ 23.2
NCBP2P52298 MITD1-201ENST00000289359 939 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.22e-11■■■■□ 23.2
NCBP2P52298 MITD1-203ENST00000413710 1083 ntTSL 56.73□□□□□ -1.332e-11■■■■□ 23.2
NCBP2P52298 MITD1-206ENST00000464685 3270 ntTSL 1 (best)6.4□□□□□ -1.382e-11■■■■□ 23.2
NCBP2P52298 MITD1-204ENST00000422537 971 ntTSL 55.68□□□□□ -1.52e-11■■■■□ 23.2
NCBP2P52298 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.76■□□□□ 0.113e-6■■■■□ 23.2
NCBP2P52298 PDE6D-205ENST00000486044 1005 ntTSL 214.45□□□□□ -0.13e-6■■■■□ 23.2
NCBP2P52298 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.173e-6■■■■□ 23.2
NCBP2P52298 PDE6D-204ENST00000477748 996 ntTSL 1 (best)12.99□□□□□ -0.333e-6■■■■□ 23.2
NCBP2P52298 PDE6D-203ENST00000428104 627 ntTSL 312.45□□□□□ -0.423e-6■■■■□ 23.2
NCBP2P52298 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.513e-6■■■■□ 23.2
NCBP2P52298 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.643e-6■■■■□ 23.2
NCBP2P52298 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.82■■□□□ 1.081e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-204ENST00000428005 1572 ntTSL 1 (best)21.42■■□□□ 1.022e-6■■■■□ 23.2
NCBP2P52298 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.77■□□□□ 0.921e-6■■■■□ 23.2
NCBP2P52298 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.12■□□□□ 0.812e-6■■■■□ 23.2
NCBP2P52298 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.37■□□□□ 0.532e-6■■■■□ 23.2
NCBP2P52298 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.511e-6■■■■□ 23.2
NCBP2P52298 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.52e-6■■■■□ 23.2
NCBP2P52298 KAT5-214ENST00000534104 576 ntTSL 417.56■□□□□ 0.41e-6■■■■□ 23.2
NCBP2P52298 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.192e-6■■■■□ 23.2
NCBP2P52298 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.9■□□□□ 0.142e-6■■■■□ 23.2
NCBP2P52298 JRKL-202ENST00000546177 736 ntTSL 1 (best)15.53■□□□□ 0.082e-6■■■■□ 23.2
NCBP2P52298 KAT5-211ENST00000532042 763 ntTSL 215.07■□□□□ 01e-6■■■■□ 23.2
NCBP2P52298 PC-207ENST00000528403 706 ntTSL 214.92□□□□□ -0.022e-6■■■■□ 23.2
NCBP2P52298 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.69□□□□□ -0.062e-6■■■■□ 23.2
NCBP2P52298 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.67□□□□□ -0.062e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-208ENST00000437266 3407 ntTSL 1 (best)14.66□□□□□ -0.062e-6■■■■□ 23.2
NCBP2P52298 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.62□□□□□ -0.071e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.8□□□□□ -0.22e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.22e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.242e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.46□□□□□ -0.252e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.272e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-209ENST00000438530 3825 ntTSL 1 (best)13.21□□□□□ -0.292e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.16□□□□□ -0.32e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-215ENST00000457377 3600 ntTSL 1 (best)12.56□□□□□ -0.42e-6■■■■□ 23.2
NCBP2P52298 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.44□□□□□ -0.422e-6■■■■□ 23.2
NCBP2P52298 PC-212ENST00000531614 690 ntTSL 512.12□□□□□ -0.472e-6■■■■□ 23.2
NCBP2P52298 JRKL-201ENST00000332349 2855 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.552e-6■■■■□ 23.2
NCBP2P52298 C1orf52-202ENST00000344356 504 ntTSL 1 (best) BASIC10.42□□□□□ -0.742e-6■■■■□ 23.2
NCBP2P52298 C1orf52-204ENST00000493514 631 ntTSL 1 (best)10.42□□□□□ -0.742e-6■■■■□ 23.2
NCBP2P52298 C1orf52-201ENST00000294661 3391 ntTSL 1 (best)9.6□□□□□ -0.872e-6■■■■□ 23.2
NCBP2P52298 CWF19L1-204ENST00000468709 2402 ntTSL 29.25□□□□□ -0.932e-6■■■■□ 23.2
NCBP2P52298 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.152e-6■■■■□ 23.2
NCBP2P52298 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.162e-6■■■■□ 23.2
NCBP2P52298 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.212e-6■■■■□ 23.2
NCBP2P52298 AC138123.2-202ENST00000549930 249 ntTSL 56.64□□□□□ -1.352e-6■■■■□ 23.2
NCBP2P52298 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.45□□□□□ -1.382e-6■■■■□ 23.2
NCBP2P52298 CWF19L1-207ENST00000482452 1606 ntTSL 55.81□□□□□ -1.482e-6■■■■□ 23.2
NCBP2P52298 CWF19L1-205ENST00000473842 654 ntTSL 54.46□□□□□ -1.72e-6■■■■□ 23.2
NCBP2P52298 ARFIP1-206ENST00000509413 531 ntTSL 34.09□□□□□ -1.752e-6■■■■□ 23.2
NCBP2P52298 CWF19L1-208ENST00000496796 727 ntTSL 32.98□□□□□ -1.932e-6■■■■□ 23.2
NCBP2P52298 CWF19L1-203ENST00000466955 659 ntTSL 32.02□□□□□ -2.092e-6■■■■□ 23.2
NCBP2P52298 IQGAP3-203ENST00000491900 5294 ntTSL 1 (best)11.71□□□□□ -0.547e-8■■■■□ 23.2
NCBP2P52298 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.67e-8■■■■□ 23.2
NCBP2P52298 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.085e-10■■■■□ 23.1
NCBP2P52298 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.925e-10■■■■□ 23.1
NCBP2P52298 SLC19A1-205ENST00000443742 777 ntTSL 314.42□□□□□ -0.15e-10■■■■□ 23.1
NCBP2P52298 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.235e-10■■■■□ 23.1
NCBP2P52298 SLC16A3-204ENST00000578522 535 ntTSL 414.87□□□□□ -0.035e-15■■■■□ 23.1
NCBP2P52298 MKNK2-210ENST00000589534 454 ntTSL 224.8■■□□□ 1.563e-6■■■■□ 23
NCBP2P52298 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.533e-6■■■■□ 23
NCBP2P52298 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.612e-12■■■■□ 23
NCBP2P52298 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.572e-12■■■■□ 23
NCBP2P52298 MAD1L1-205ENST00000421113 564 ntTSL 417.43■□□□□ 0.382e-6■■■■□ 23
NCBP2P52298 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.92■□□□□ 0.32e-12■■■■□ 23
NCBP2P52298 ZC3H3-202ENST00000528401 546 ntTSL 316.33■□□□□ 0.23e-7■■■■□ 23
NCBP2P52298 TMEM8A-208ENST00000476735 801 ntTSL 516.32■□□□□ 0.22e-12■■■■□ 23
NCBP2P52298 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.033e-6■■■■□ 23
NCBP2P52298 MAD1L1-210ENST00000444373 535 ntTSL 414.57□□□□□ -0.082e-6■■■■□ 23
NCBP2P52298 EIF4ENIF1-203ENST00000397518 251 ntTSL 1 (best)13.8□□□□□ -0.22e-12■■■■□ 23
Retrieved 100 of 18,329 protein–RNA pairs in 286.7 ms