Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCL4P13236 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
CCL4P13236 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.33■■□□□ 1
CCL4P13236 AC138932.3-201ENST00000567634 1902 ntBASIC21.33■■□□□ 1
CCL4P13236 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.32■■□□□ 1
CCL4P13236 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCL4P13236 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCL4P13236 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.32■■□□□ 1
CCL4P13236 KRT18P5-201ENST00000436075 1291 ntBASIC21.32■■□□□ 1
CCL4P13236 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.32■■□□□ 1
CCL4P13236 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCL4P13236 AC022517.1-201ENST00000592429 346 ntBASIC21.32■■□□□ 1
CCL4P13236 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCL4P13236 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCL4P13236 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCL4P13236 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCL4P13236 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL4P13236 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.31■■□□□ 1
CCL4P13236 MIR572-201ENST00000384983 95 ntBASIC21.31■■□□□ 1
CCL4P13236 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.31■■□□□ 1
CCL4P13236 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCL4P13236 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.31■■□□□ 1
CCL4P13236 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL4P13236 DUX4L2-201ENST00000561772 1275 ntBASIC21.31■■□□□ 1
CCL4P13236 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.31■■□□□ 1
CCL4P13236 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.31■■□□□ 1
CCL4P13236 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCL4P13236 AL358852.1-201ENST00000623174 1268 ntBASIC21.31■■□□□ 1
CCL4P13236 DUX4L6-201ENST00000626483 1275 ntBASIC21.31■■□□□ 1
CCL4P13236 DUX4L1-201ENST00000627662 1275 ntBASIC21.31■■□□□ 1
CCL4P13236 DUX4L8-201ENST00000629013 1275 ntBASIC21.31■■□□□ 1
CCL4P13236 DUX4L3-201ENST00000630187 1275 ntBASIC21.31■■□□□ 1
CCL4P13236 DUX4L7-201ENST00000630678 1275 ntBASIC21.31■■□□□ 1
CCL4P13236 DUX4L5-201ENST00000630834 1275 ntBASIC21.31■■□□□ 1
CCL4P13236 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.31■■□□□ 1
CCL4P13236 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL4P13236 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL4P13236 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCL4P13236 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCL4P13236 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCL4P13236 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.3■■□□□ 1
CCL4P13236 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCL4P13236 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCL4P13236 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.3■■□□□ 1
CCL4P13236 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCL4P13236 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.3■■□□□ 1
CCL4P13236 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.3■■□□□ 1
CCL4P13236 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCL4P13236 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.29■■□□□ 1
CCL4P13236 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCL4P13236 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCL4P13236 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.29■■□□□ 1
CCL4P13236 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.29■■□□□ 1
CCL4P13236 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCL4P13236 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCL4P13236 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.29■■□□□ 1
CCL4P13236 AC027612.3-201ENST00000413684 1047 ntBASIC21.29■■□□□ 1
CCL4P13236 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CCL4P13236 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.29■■□□□ 1
CCL4P13236 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCL4P13236 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.29■■□□□ 1
CCL4P13236 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.29■■□□□ 1
CCL4P13236 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCL4P13236 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCL4P13236 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCL4P13236 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCL4P13236 AC012414.1-201ENST00000556676 535 ntBASIC21.28■■□□□ 1
CCL4P13236 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.28■■□□□ 1
CCL4P13236 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.28■■□□□ 1
CCL4P13236 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.28■■□□□ 1
CCL4P13236 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCL4P13236 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCL4P13236 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCL4P13236 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.28■■□□□ 1
CCL4P13236 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCL4P13236 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCL4P13236 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCL4P13236 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCL4P13236 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.27■■□□□ 1
CCL4P13236 FP325331.1-202ENST00000623531 1380 ntBASIC21.27■■□□□ 1
CCL4P13236 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCL4P13236 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.27■■□□□ 1
CCL4P13236 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCL4P13236 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
CCL4P13236 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.27■■□□□ 1
CCL4P13236 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCL4P13236 DUX4L4-201ENST00000566884 1269 ntBASIC21.27■■□□□ 1
CCL4P13236 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCL4P13236 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCL4P13236 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCL4P13236 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCL4P13236 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCL4P13236 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCL4P13236 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCL4P13236 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.26■□□□□ 0.99
CCL4P13236 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.26■□□□□ 0.99
CCL4P13236 AC142381.3-201ENST00000568208 1670 ntBASIC21.26■□□□□ 0.99
CCL4P13236 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCL4P13236 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CCL4P13236 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms