Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 NUBP2-209ENST00000566090 708 ntTSL 223.86■■□□□ 1.414e-9■■■□□ 15.7
XRCC6P12956 NUBP2-204ENST00000563821 2235 nt22.76■■□□□ 1.234e-9■■■□□ 15.7
XRCC6P12956 NUBP2-210ENST00000566447 511 ntTSL 421.8■■□□□ 1.084e-9■■■□□ 15.7
XRCC6P12956 NUBP2-215ENST00000568834 1173 ntTSL 221.8■■□□□ 1.084e-9■■■□□ 15.7
XRCC6P12956 NUBP2-207ENST00000565603 995 ntTSL 321.75■■□□□ 1.074e-9■■■□□ 15.7
XRCC6P12956 NUBP2-212ENST00000568287 839 ntTSL 521.56■■□□□ 1.044e-9■■■□□ 15.7
XRCC6P12956 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.51■■□□□ 1.034e-9■■■□□ 15.7
XRCC6P12956 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.014e-9■■■□□ 15.7
XRCC6P12956 NUBP2-202ENST00000562263 811 ntTSL 320.27■□□□□ 0.844e-9■■■□□ 15.7
XRCC6P12956 NUBP2-216ENST00000569898 582 ntTSL 319.11■□□□□ 0.654e-9■■■□□ 15.7
XRCC6P12956 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.98■□□□□ 0.634e-9■■■□□ 15.7
XRCC6P12956 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.52■□□□□ 0.44e-9■■■□□ 15.7
XRCC6P12956 NUBP2-203ENST00000563136 470 ntTSL 416.59■□□□□ 0.254e-9■■■□□ 15.7
XRCC6P12956 STX4-212ENST00000496977 983 ntTSL 527.35■■□□□ 1.971e-6■■■□□ 15.6
XRCC6P12956 STX4-204ENST00000460668 842 ntTSL 327.35■■□□□ 1.971e-6■■■□□ 15.6
XRCC6P12956 STX4-210ENST00000487411 1290 ntTSL 1 (best)25.21■■□□□ 1.631e-6■■■□□ 15.6
XRCC6P12956 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.64■■□□□ 1.531e-6■■■□□ 15.6
XRCC6P12956 STX4-211ENST00000493902 1588 ntTSL 524.63■■□□□ 1.531e-6■■■□□ 15.6
XRCC6P12956 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.51e-6■■■□□ 15.6
XRCC6P12956 STX4-215ENST00000565483 846 ntTSL 524.17■■□□□ 1.461e-6■■■□□ 15.6
XRCC6P12956 STX4-203ENST00000457779 571 ntTSL 324.08■■□□□ 1.451e-6■■■□□ 15.6
XRCC6P12956 STX4-216ENST00000566353 696 ntTSL 223.33■■□□□ 1.331e-6■■■□□ 15.6
XRCC6P12956 STX4-205ENST00000461455 1002 ntTSL 222.72■■□□□ 1.231e-6■■■□□ 15.6
XRCC6P12956 PID1-202ENST00000392054 2745 ntTSL 2 BASIC17.03■□□□□ 0.321e-7■■■□□ 15.5
XRCC6P12956 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC16.68■□□□□ 0.261e-7■■■□□ 15.5
XRCC6P12956 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.161e-7■■■□□ 15.5
XRCC6P12956 PID1-206ENST00000534952 553 ntTSL 414.91□□□□□ -0.021e-7■■■□□ 15.5
XRCC6P12956 PID1-201ENST00000354069 839 ntTSL 3 BASIC9.11□□□□□ -0.951e-7■■■□□ 15.5
XRCC6P12956 PID1-205ENST00000482518 479 ntTSL 26.67□□□□□ -1.341e-7■■■□□ 15.5
XRCC6P12956 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.8■□□□□ 0.922e-6■■■□□ 15.4
XRCC6P12956 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.381e-6■■■□□ 15.3
XRCC6P12956 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC23.53■■□□□ 1.363e-8■■■□□ 15.3
XRCC6P12956 GATA2-204ENST00000489987 1433 ntTSL 223.15■■□□□ 1.33e-8■■■□□ 15.3
XRCC6P12956 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.923e-8■■■□□ 15.3
XRCC6P12956 WSB1-206ENST00000578312 692 ntTSL 417.19■□□□□ 0.343e-8■■■□□ 15.3
XRCC6P12956 WSB1-214ENST00000583742 544 ntTSL 417.19■□□□□ 0.343e-8■■■□□ 15.3
XRCC6P12956 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.073e-8■■■□□ 15.3
XRCC6P12956 NASP-207ENST00000464190 604 ntTSL 215.44■□□□□ 0.063e-8■■■□□ 15.3
XRCC6P12956 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.143e-8■■■□□ 15.3
XRCC6P12956 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC13.96□□□□□ -0.173e-8■■■□□ 15.3
XRCC6P12956 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC13.84□□□□□ -0.193e-8■■■□□ 15.3
XRCC6P12956 WSB1-213ENST00000583193 552 ntTSL 4 BASIC13.32□□□□□ -0.283e-8■■■□□ 15.3
XRCC6P12956 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC13.32□□□□□ -0.283e-8■■■□□ 15.3
XRCC6P12956 NASP-219ENST00000530840 531 ntTSL 513.1□□□□□ -0.313e-8■■■□□ 15.3
XRCC6P12956 NASP-213ENST00000527470 532 ntTSL 413.08□□□□□ -0.323e-8■■■□□ 15.3
XRCC6P12956 NASP-217ENST00000529333 778 ntTSL 413.08□□□□□ -0.323e-8■■■□□ 15.3
XRCC6P12956 NASP-220ENST00000531532 554 ntTSL 413.08□□□□□ -0.323e-8■■■□□ 15.3
XRCC6P12956 NASP-225ENST00000629893 253 ntTSL 5 BASIC12.72□□□□□ -0.373e-8■■■□□ 15.3
XRCC6P12956 NASP-215ENST00000528084 535 ntTSL 412.72□□□□□ -0.373e-8■■■□□ 15.3
XRCC6P12956 WSB1-209ENST00000581185 1900 ntTSL 2 BASIC12.72□□□□□ -0.373e-8■■■□□ 15.3
XRCC6P12956 WSB1-205ENST00000487603 1898 ntTSL 212.52□□□□□ -0.413e-8■■■□□ 15.3
XRCC6P12956 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.453e-8■■■□□ 15.3
XRCC6P12956 WSB1-208ENST00000581089 697 ntTSL 211.53□□□□□ -0.563e-8■■■□□ 15.3
XRCC6P12956 WSB1-211ENST00000582208 625 ntTSL 311.19□□□□□ -0.623e-8■■■□□ 15.3
XRCC6P12956 WSB1-210ENST00000581440 943 ntTSL 310.95□□□□□ -0.663e-8■■■□□ 15.3
XRCC6P12956 WSB1-204ENST00000467843 4187 ntTSL 1 (best)10.86□□□□□ -0.673e-8■■■□□ 15.3
XRCC6P12956 NASP-222ENST00000534101 754 ntTSL 34.84□□□□□ -1.633e-8■■■□□ 15.3
XRCC6P12956 WSB1-216ENST00000584114 479 ntTSL 33.68□□□□□ -1.823e-8■■■□□ 15.3
XRCC6P12956 SNORA62-201ENST00000365493 153 ntBASIC4.83□□□□□ -1.641e-7■■■□□ 15.3
XRCC6P12956 IGFL2-AS1-201ENST00000594027 294 ntTSL 312.33□□□□□ -0.442e-6■■■□□ 15.3
XRCC6P12956 IGFL2-AS1-205ENST00000599817 340 ntTSL 212.02□□□□□ -0.492e-6■■■□□ 15.3
XRCC6P12956 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC11.46□□□□□ -0.572e-6■■■□□ 15.3
XRCC6P12956 LDB1-204ENST00000490751 762 ntTSL 234.91■■■■□ 3.183e-6■■■□□ 15.3
XRCC6P12956 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.82■■■□□ 2.523e-6■■■□□ 15.3
XRCC6P12956 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.023e-6■■■□□ 15.3
XRCC6P12956 DNAJC11-204ENST00000451196 1357 ntTSL 1 (best)22.38■■□□□ 1.171e-6■■■□□ 15.3
XRCC6P12956 NAA15-205ENST00000482087 550 ntTSL 421.69■■□□□ 1.061e-6■■■□□ 15.3
XRCC6P12956 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.51■■□□□ 1.031e-6■■■□□ 15.3
XRCC6P12956 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.94■□□□□ 0.783e-14■■■□□ 15.3
XRCC6P12956 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.253e-9■■■□□ 15.3
XRCC6P12956 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.218e-25■■■□□ 15.3
XRCC6P12956 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11e-6■■■□□ 15.3
XRCC6P12956 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.081e-6■■■□□ 15.3
XRCC6P12956 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC15.31■□□□□ 0.041e-6■■■□□ 15.3
XRCC6P12956 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.011e-6■■■□□ 15.3
XRCC6P12956 MTUS1-225ENST00000523718 3354 ntTSL 1 (best)14.31□□□□□ -0.121e-6■■■□□ 15.3
XRCC6P12956 DNAJC11-205ENST00000460594 581 ntTSL 313.83□□□□□ -0.21e-6■■■□□ 15.3
XRCC6P12956 DNAJC11-210ENST00000473993 755 ntTSL 513.83□□□□□ -0.21e-6■■■□□ 15.3
XRCC6P12956 MAP4-208ENST00000429422 3724 ntTSL 1 (best)13.42□□□□□ -0.261e-6■■■□□ 15.3
XRCC6P12956 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.33e-9■■■□□ 15.3
XRCC6P12956 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.63e-9■■■□□ 15.3
XRCC6P12956 VMP1-208ENST00000588617 884 ntTSL 48.74□□□□□ -1.018e-25■■■□□ 15.3
XRCC6P12956 DNAJC11-211ENST00000485073 613 ntTSL 28.72□□□□□ -1.011e-6■■■□□ 15.3
XRCC6P12956 DNAJC11-203ENST00000426784 975 ntTSL 38.34□□□□□ -1.071e-6■■■□□ 15.3
XRCC6P12956 VMP1-213ENST00000591877 791 ntTSL 38.26□□□□□ -1.098e-25■■■□□ 15.3
XRCC6P12956 DNAJC11-208ENST00000469318 355 ntTSL 1 (best)8.13□□□□□ -1.111e-6■■■□□ 15.3
XRCC6P12956 MAP4-203ENST00000383736 2282 ntTSL 57.94□□□□□ -1.141e-6■■■□□ 15.3
XRCC6P12956 VMP1-215ENST00000592619 838 ntTSL 57.47□□□□□ -1.218e-25■■■□□ 15.3
XRCC6P12956 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.67□□□□□ -1.51e-6■■■□□ 15.3
XRCC6P12956 VMP1-205ENST00000587470 995 ntTSL 25.22□□□□□ -1.578e-25■■■□□ 15.3
XRCC6P12956 VMP1-216ENST00000592790 4325 nt4.29□□□□□ -1.728e-25■■■□□ 15.3
XRCC6P12956 VMP1-212ENST00000591782 729 ntTSL 54.22□□□□□ -1.738e-25■■■□□ 15.3
XRCC6P12956 MAP4-214ENST00000482752 386 ntTSL 33.12□□□□□ -1.911e-6■■■□□ 15.3
XRCC6P12956 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.591e-6■■■□□ 15.2
XRCC6P12956 SHCBP1L-204ENST00000488956 2540 ntTSL 224.51■■□□□ 1.511e-6■■■□□ 15.2
XRCC6P12956 SHCBP1L-203ENST00000483655 2023 ntTSL 1 (best)22.26■■□□□ 1.151e-6■■■□□ 15.2
XRCC6P12956 RNA5SP71-201ENST00000362967 126 ntBASIC9.12□□□□□ -0.951e-6■■■□□ 15.2
XRCC6P12956 SHCBP1L-202ENST00000467208 692 ntTSL 58.95□□□□□ -0.981e-6■■■□□ 15.2
XRCC6P12956 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.81■■□□□ 1.41e-6■■■□□ 15.2
XRCC6P12956 SEMA7A-204ENST00000567345 674 ntTSL 421.65■■□□□ 1.061e-6■■■□□ 15.2
Retrieved 100 of 6,788 protein–RNA pairs in 47.3 ms