Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
CLDN1O95832 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.97■□□□□ 0.79
CLDN1O95832 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN1O95832 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.97■□□□□ 0.79
CLDN1O95832 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN1O95832 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN1O95832 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CLDN1O95832 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN1O95832 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN1O95832 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN1O95832 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN1O95832 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN1O95832 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN1O95832 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN1O95832 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN1O95832 AC104771.1-201ENST00000603335 964 ntBASIC19.96■□□□□ 0.79
CLDN1O95832 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN1O95832 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLDN1O95832 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN1O95832 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN1O95832 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN1O95832 CDCA4P2-201ENST00000441182 718 ntBASIC19.95■□□□□ 0.78
CLDN1O95832 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN1O95832 IGHV3-19-201ENST00000521488 291 ntBASIC19.95■□□□□ 0.78
CLDN1O95832 AC066615.1-201ENST00000640911 628 ntBASIC19.95■□□□□ 0.78
CLDN1O95832 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN1O95832 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN1O95832 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN1O95832 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN1O95832 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN1O95832 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN1O95832 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN1O95832 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN1O95832 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN1O95832 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN1O95832 pRNA.6-201ENST00000610482 90 ntBASIC19.94■□□□□ 0.78
CLDN1O95832 pRNA.5-201ENST00000612139 90 ntBASIC19.94■□□□□ 0.78
CLDN1O95832 pRNA.11-201ENST00000618423 90 ntBASIC19.94■□□□□ 0.78
CLDN1O95832 pRNA.13-201ENST00000619112 90 ntBASIC19.94■□□□□ 0.78
CLDN1O95832 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN1O95832 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
CLDN1O95832 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CLDN1O95832 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN1O95832 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN1O95832 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN1O95832 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN1O95832 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN1O95832 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.93■□□□□ 0.78
CLDN1O95832 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CLDN1O95832 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN1O95832 AC073111.5-205ENST00000641717 521 ntBASIC19.93■□□□□ 0.78
CLDN1O95832 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN1O95832 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN1O95832 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CLDN1O95832 LINC02228-203ENST00000641970 1355 ntBASIC19.93■□□□□ 0.78
CLDN1O95832 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN1O95832 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
CLDN1O95832 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN1O95832 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN1O95832 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.92■□□□□ 0.78
CLDN1O95832 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN1O95832 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN1O95832 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLDN1O95832 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN1O95832 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLDN1O95832 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN1O95832 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLDN1O95832 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN1O95832 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN1O95832 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN1O95832 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLDN1O95832 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN1O95832 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN1O95832 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN1O95832 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN1O95832 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN1O95832 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN1O95832 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLDN1O95832 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLDN1O95832 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.91■□□□□ 0.78
CLDN1O95832 AC006015.1-201ENST00000429970 570 ntBASIC19.91■□□□□ 0.78
CLDN1O95832 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN1O95832 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.91■□□□□ 0.78
CLDN1O95832 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.91■□□□□ 0.78
CLDN1O95832 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.91■□□□□ 0.78
CLDN1O95832 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.91■□□□□ 0.78
CLDN1O95832 AC010501.1-201ENST00000606270 1962 ntBASIC19.91■□□□□ 0.78
CLDN1O95832 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN1O95832 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN1O95832 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLDN1O95832 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN1O95832 AC097639.1-201ENST00000565519 1891 ntBASIC19.9■□□□□ 0.78
CLDN1O95832 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN1O95832 ERN1-208ENST00000606895 2068 ntBASIC19.9■□□□□ 0.78
CLDN1O95832 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN1O95832 AL355802.2-201ENST00000402069 882 ntBASIC19.9■□□□□ 0.78
CLDN1O95832 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLDN1O95832 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.9■□□□□ 0.78
CLDN1O95832 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN1O95832 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms