Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC044849.2-201ENST00000606596 710 ntBASIC18.73■□□□□ 0.59
SIX6O95475 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX6O95475 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SIX6O95475 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX6O95475 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX6O95475 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX6O95475 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX6O95475 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX6O95475 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SIX6O95475 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SIX6O95475 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX6O95475 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.72■□□□□ 0.59
SIX6O95475 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX6O95475 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX6O95475 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX6O95475 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SIX6O95475 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX6O95475 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX6O95475 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX6O95475 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX6O95475 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX6O95475 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SIX6O95475 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX6O95475 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L13-201ENST00000554103 1267 ntBASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L15-201ENST00000611059 1267 ntBASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L23-201ENST00000615195 1269 ntBASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L24-201ENST00000617576 1269 ntBASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L22-201ENST00000618238 1269 ntBASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L20-201ENST00000619712 1269 ntBASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L21-201ENST00000622058 1269 ntBASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L10-201ENST00000622460 1267 ntBASIC18.71■□□□□ 0.59
SIX6O95475 DUX4L25-201ENST00000624915 1269 ntBASIC18.71■□□□□ 0.59
SIX6O95475 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX6O95475 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX6O95475 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX6O95475 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX6O95475 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SIX6O95475 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX6O95475 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SIX6O95475 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX6O95475 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.7■□□□□ 0.58
SIX6O95475 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SIX6O95475 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SIX6O95475 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SIX6O95475 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX6O95475 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX6O95475 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SIX6O95475 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX6O95475 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.69■□□□□ 0.58
SIX6O95475 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX6O95475 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX6O95475 AP006261.1-201ENST00000584783 668 ntBASIC18.69■□□□□ 0.58
SIX6O95475 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.69■□□□□ 0.58
SIX6O95475 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX6O95475 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIX6O95475 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX6O95475 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX6O95475 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX6O95475 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX6O95475 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SIX6O95475 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SIX6O95475 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.68■□□□□ 0.58
SIX6O95475 AC126177.7-201ENST00000547904 679 ntBASIC18.68■□□□□ 0.58
SIX6O95475 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.68■□□□□ 0.58
SIX6O95475 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.68■□□□□ 0.58
SIX6O95475 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIX6O95475 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SIX6O95475 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SIX6O95475 AL161729.1-201ENST00000604104 1402 ntBASIC18.67■□□□□ 0.58
SIX6O95475 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX6O95475 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX6O95475 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SIX6O95475 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX6O95475 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SIX6O95475 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX6O95475 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX6O95475 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIX6O95475 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX6O95475 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX6O95475 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.66■□□□□ 0.58
SIX6O95475 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.66■□□□□ 0.58
SIX6O95475 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX6O95475 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms