Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNKO75909 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCNKO75909 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCNKO75909 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CCNKO75909 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNKO75909 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCNKO75909 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNKO75909 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCNKO75909 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNKO75909 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNKO75909 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNKO75909 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCNKO75909 AC092053.2-201ENST00000640557 1818 ntBASIC19.39■□□□□ 0.69
CCNKO75909 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNKO75909 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCNKO75909 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNKO75909 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNKO75909 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNKO75909 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNKO75909 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNKO75909 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNKO75909 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNKO75909 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNKO75909 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNKO75909 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.37■□□□□ 0.69
CCNKO75909 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CCNKO75909 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCNKO75909 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.37■□□□□ 0.69
CCNKO75909 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNKO75909 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNKO75909 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNKO75909 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCNKO75909 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCNKO75909 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNKO75909 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCNKO75909 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.36■□□□□ 0.69
CCNKO75909 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.36■□□□□ 0.69
CCNKO75909 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCNKO75909 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCNKO75909 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.36■□□□□ 0.69
CCNKO75909 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNKO75909 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.35■□□□□ 0.69
CCNKO75909 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCNKO75909 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.35■□□□□ 0.69
CCNKO75909 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.35■□□□□ 0.69
CCNKO75909 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCNKO75909 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNKO75909 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNKO75909 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNKO75909 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCNKO75909 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNKO75909 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNKO75909 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.34■□□□□ 0.69
CCNKO75909 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNKO75909 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNKO75909 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNKO75909 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNKO75909 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCNKO75909 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNKO75909 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCNKO75909 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCNKO75909 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNKO75909 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.33■□□□□ 0.69
CCNKO75909 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCNKO75909 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCNKO75909 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNKO75909 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.33■□□□□ 0.69
CCNKO75909 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCNKO75909 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms