Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.17■□□□□ 0.82
SSX4O60224 AC120024.1-201ENST00000562672 995 ntBASIC20.17■□□□□ 0.82
SSX4O60224 GUSBP5-202ENST00000510805 1989 ntBASIC20.17■□□□□ 0.82
SSX4O60224 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSX4O60224 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSX4O60224 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX4O60224 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SSX4O60224 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSX4O60224 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SSX4O60224 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX4O60224 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX4O60224 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX4O60224 TSPY9P-201ENST00000440215 945 ntBASIC20.16■□□□□ 0.82
SSX4O60224 TSPY11P-201ENST00000442607 1045 ntBASIC20.16■□□□□ 0.82
SSX4O60224 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.16■□□□□ 0.82
SSX4O60224 UNC93B8-201ENST00000511903 705 ntBASIC20.16■□□□□ 0.82
SSX4O60224 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.16■□□□□ 0.82
SSX4O60224 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.16■□□□□ 0.82
SSX4O60224 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX4O60224 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX4O60224 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSX4O60224 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SSX4O60224 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SSX4O60224 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SSX4O60224 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.16■□□□□ 0.82
SSX4O60224 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX4O60224 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX4O60224 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX4O60224 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSX4O60224 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.15■□□□□ 0.82
SSX4O60224 AC127496.7-201ENST00000625110 1798 ntBASIC20.15■□□□□ 0.82
SSX4O60224 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSX4O60224 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
SSX4O60224 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSX4O60224 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSX4O60224 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSX4O60224 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SSX4O60224 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSX4O60224 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.14■□□□□ 0.81
SSX4O60224 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.14■□□□□ 0.81
SSX4O60224 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSX4O60224 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
SSX4O60224 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSX4O60224 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.14■□□□□ 0.81
SSX4O60224 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.14■□□□□ 0.81
SSX4O60224 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSX4O60224 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSX4O60224 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SSX4O60224 FOXO3B-201ENST00000395675 1928 ntBASIC20.14■□□□□ 0.81
SSX4O60224 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SSX4O60224 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SSX4O60224 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSX4O60224 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSX4O60224 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
SSX4O60224 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSX4O60224 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSX4O60224 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.13■□□□□ 0.81
SSX4O60224 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.13■□□□□ 0.81
SSX4O60224 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.13■□□□□ 0.81
SSX4O60224 AC137630.3-201ENST00000607245 391 ntBASIC20.13■□□□□ 0.81
SSX4O60224 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSX4O60224 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSX4O60224 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSX4O60224 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.12■□□□□ 0.81
SSX4O60224 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.12■□□□□ 0.81
SSX4O60224 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSX4O60224 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSX4O60224 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.12■□□□□ 0.81
SSX4O60224 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.12■□□□□ 0.81
SSX4O60224 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSX4O60224 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSX4O60224 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSX4O60224 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.11■□□□□ 0.81
SSX4O60224 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSX4O60224 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.11■□□□□ 0.81
SSX4O60224 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.11■□□□□ 0.81
SSX4O60224 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSX4O60224 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSX4O60224 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSX4O60224 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSX4O60224 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSX4O60224 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSX4O60224 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SSX4O60224 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSX4O60224 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.1■□□□□ 0.81
SSX4O60224 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SSX4O60224 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSX4O60224 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SSX4O60224 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SSX4O60224 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSX4O60224 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.09■□□□□ 0.81
SSX4O60224 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSX4O60224 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSX4O60224 DUSP8P3-201ENST00000399571 1760 ntBASIC20.09■□□□□ 0.81
SSX4O60224 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSX4O60224 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SSX4O60224 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
SSX4O60224 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSX4O60224 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSX4O60224 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms