| WNT9A | O14904 | RAB11FIP1-203 | ENST00000522727 | 1866 nt | TSL 1 (best) BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | ZDHHC16-205 | ENST00000370846 | 1280 nt | TSL 3 BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | AC008764.7-201 | ENST00000593779 | 1081 nt | BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | NKILA-201 | ENST00000613231 | 537 nt | TSL 4 BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | AC011298.3-201 | ENST00000615796 | 283 nt | BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | B3GAT3-201 | ENST00000265471 | 1641 nt | APPRIS P1 TSL 1 (best) BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | ODF3L2-201 | ENST00000315489 | 1604 nt | APPRIS P2 TSL 1 (best) BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | RAX2-202 | ENST00000555978 | 2145 nt | APPRIS P1 TSL 1 (best) BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | PON2-218 | ENST00000633531 | 1653 nt | APPRIS P1 TSL 1 (best) BASIC | 22.52 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | IFNGR2-202 | ENST00000381995 | 1742 nt | APPRIS ALT2 TSL 5 BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | SETD9-201 | ENST00000285947 | 1619 nt | APPRIS P1 TSL 1 (best) BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | CCDC160-201 | ENST00000370809 | 1299 nt | APPRIS P1 TSL 5 BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | MOSPD3-203 | ENST00000393950 | 1191 nt | APPRIS P1 TSL 1 (best) BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC068580.1-201 | ENST00000446489 | 252 nt | TSL 3 BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | RAB6B-203 | ENST00000469959 | 500 nt | TSL 3 BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | ACAP1-206 | ENST00000571471 | 320 nt | TSL 2 BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | SAP25-203 | ENST00000614631 | 987 nt | APPRIS P2 TSL 2 BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | RABGGTA-202 | ENST00000399409 | 2265 nt | APPRIS P1 TSL 1 (best) BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | TBX1-203 | ENST00000359500 | 1538 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | EPM2A-209 | ENST00000638262 | 2679 nt | TSL 1 (best) BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | HSD11B2-201 | ENST00000326152 | 1900 nt | APPRIS P1 TSL 1 (best) BASIC | 22.51 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | SLC35C1-202 | ENST00000442528 | 1756 nt | TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | TTLL1-201 | ENST00000266254 | 1645 nt | APPRIS P1 TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AKT1-203 | ENST00000407796 | 2710 nt | APPRIS P1 TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | LBX2-202 | ENST00000377566 | 1186 nt | APPRIS P1 TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | STOX1-202 | ENST00000399162 | 935 nt | TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | STOX1-203 | ENST00000399165 | 1135 nt | TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | HES6-206 | ENST00000409574 | 738 nt | TSL 2 BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | CBWD3-212 | ENST00000616550 | 721 nt | TSL 2 BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | CBWD6-216 | ENST00000617933 | 721 nt | TSL 3 BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | CPLX1-201 | ENST00000304062 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | ABCB10P4-201 | ENST00000566803 | 2184 nt | BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | ID2-201 | ENST00000234091 | 2041 nt | APPRIS P1 TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | GJD4-201 | ENST00000321660 | 1580 nt | APPRIS P1 TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | RARA-203 | ENST00000394086 | 2008 nt | TSL 2 BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | RASA4CP-201 | ENST00000424092 | 1398 nt | BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | CHST6-202 | ENST00000390664 | 2093 nt | APPRIS P1 TSL 1 (best) BASIC | 22.5 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | KISS1R-201 | ENST00000234371 | 1625 nt | APPRIS P1 TSL 1 (best) BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | PON2-217 | ENST00000633192 | 1876 nt | TSL 1 (best) BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | CTAG2-202 | ENST00000369585 | 748 nt | APPRIS P1 TSL 1 (best) BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | FAM222B-213 | ENST00000583522 | 556 nt | TSL 2 BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC010336.5-201 | ENST00000594308 | 317 nt | TSL 3 BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AL138724.1-201 | ENST00000606771 | 1088 nt | BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC092666.2-201 | ENST00000613287 | 246 nt | BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | PCSK6-218 | ENST00000619160 | 3093 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | KCNIP1-203 | ENST00000390656 | 2249 nt | TSL 5 BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC064853.3-201 | ENST00000641801 | 1658 nt | APPRIS P1 BASIC | 22.49 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | RCC2-201 | ENST00000375433 | 2030 nt | APPRIS P1 TSL 1 (best) BASIC | 22.48 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | MIR3181-201 | ENST00000578512 | 73 nt | BASIC | 22.48 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC241377.3-202 | ENST00000626088 | 1088 nt | BASIC | 22.48 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC241585.3-202 | ENST00000628937 | 1088 nt | BASIC | 22.48 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC245100.8-202 | ENST00000629247 | 1058 nt | BASIC | 22.48 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | LSM8-203 | ENST00000422760 | 1920 nt | TSL 1 (best) BASIC | 22.48 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | ARG2-201 | ENST00000261783 | 2045 nt | APPRIS P1 TSL 1 (best) BASIC | 22.48 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | RAP1B-207 | ENST00000450214 | 1466 nt | TSL 2 BASIC | 22.47 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | WISP2-203 | ENST00000372868 | 1600 nt | APPRIS P1 TSL 3 BASIC | 22.47 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | ACSF2-203 | ENST00000502667 | 2098 nt | TSL 2 BASIC | 22.47 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC099791.1-201 | ENST00000416440 | 715 nt | BASIC | 22.47 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | TLX3-201 | ENST00000296921 | 1493 nt | APPRIS P1 TSL 1 (best) BASIC | 22.47 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | IRF3-228 | ENST00000601291 | 1556 nt | TSL 1 (best) BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | WTAP-201 | ENST00000337387 | 1622 nt | TSL 1 (best) BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | VGF-203 | ENST00000611537 | 1622 nt | TSL 5 BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | KREMEN2-204 | ENST00000572045 | 2339 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | ATAD3B-201 | ENST00000308647 | 2448 nt | APPRIS P1 TSL 1 (best) BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC027682.1-201 | ENST00000562846 | 899 nt | BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC104564.5-201 | ENST00000584986 | 278 nt | TSL 3 BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | AC136469.2-201 | ENST00000623944 | 1028 nt | BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | HNRNPD-202 | ENST00000352301 | 1667 nt | APPRIS ALT1 TSL 1 (best) BASIC | 22.46 | ■■□□□ 1.19 | | |
| WNT9A | O14904 | SLCO3A1-201 | ENST00000318445 | 5115 nt | APPRIS P1 TSL 1 (best) BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | PTH1R-202 | ENST00000418619 | 2070 nt | APPRIS P1 TSL 5 BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | P4HA3-201 | ENST00000331597 | 2274 nt | APPRIS P1 TSL 1 (best) BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | FXYD7-201 | ENST00000270310 | 712 nt | APPRIS P2 TSL 1 (best) BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | FAIM-202 | ENST00000360570 | 1157 nt | APPRIS ALT1 TSL 3 BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AC007448.3-201 | ENST00000585193 | 689 nt | TSL 2 BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AC009086.3-201 | ENST00000623486 | 1008 nt | BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AC091982.4-201 | ENST00000623943 | 726 nt | TSL 2 BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | HACD3-205 | ENST00000562901 | 1797 nt | TSL 5 BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ACAA1-219 | ENST00000625927 | 1760 nt | TSL 5 BASIC | 22.45 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | LKAAEAR1-201 | ENST00000302096 | 761 nt | APPRIS ALT2 TSL 2 BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | LKAAEAR1-202 | ENST00000308906 | 868 nt | APPRIS P2 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | CLPTM1-201 | ENST00000337392 | 2604 nt | APPRIS P1 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | PXK-202 | ENST00000356151 | 2037 nt | APPRIS P1 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | CDC20-202 | ENST00000372462 | 1777 nt | APPRIS P1 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | FOXA2-201 | ENST00000377115 | 2401 nt | APPRIS P3 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | SIGLEC15-201 | ENST00000389474 | 1573 nt | APPRIS P1 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | RPUSD3-206 | ENST00000433535 | 1178 nt | TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | CREB3L2-203 | ENST00000452463 | 1105 nt | TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | SNF8-202 | ENST00000502492 | 2319 nt | APPRIS P3 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ARFIP2-205 | ENST00000525235 | 852 nt | TSL 2 BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | NPAS1-208 | ENST00000602212 | 2117 nt | APPRIS P1 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | CAPN10-207 | ENST00000391984 | 2644 nt | APPRIS P2 TSL 1 (best) BASIC | 22.44 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | RNF223-201 | ENST00000453464 | 1902 nt | APPRIS P1 TSL 2 BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AFDN-201 | ENST00000344191 | 5249 nt | TSL 5 BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | METTL21A-210 | ENST00000458426 | 1366 nt | TSL 1 (best) BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ACP4-201 | ENST00000270593 | 1347 nt | APPRIS P1 TSL 1 (best) BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | HYI-204 | ENST00000372432 | 1066 nt | TSL 1 (best) BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | CEP104-201 | ENST00000378223 | 1121 nt | TSL 1 (best) BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | PLPP5-201 | ENST00000419686 | 794 nt | TSL 2 BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | C15orf61-202 | ENST00000557807 | 769 nt | TSL 2 BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | PRSS22-203 | ENST00000571228 | 1037 nt | TSL 2 BASIC | 22.43 | ■■□□□ 1.18 | | |