Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ABCD4O14678 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD4O14678 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD4O14678 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD4O14678 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD4O14678 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.68■□□□□ 0.74
ABCD4O14678 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD4O14678 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD4O14678 AL136162.1-201ENST00000607711 1078 ntBASIC19.68■□□□□ 0.74
ABCD4O14678 AC005837.3-201ENST00000612163 286 ntBASIC19.68■□□□□ 0.74
ABCD4O14678 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ABCD4O14678 AC106739.1-201ENST00000617035 715 ntBASIC19.68■□□□□ 0.74
ABCD4O14678 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD4O14678 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ABCD4O14678 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD4O14678 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ABCD4O14678 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD4O14678 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD4O14678 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD4O14678 AC138932.3-201ENST00000567634 1902 ntBASIC19.67■□□□□ 0.74
ABCD4O14678 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ABCD4O14678 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ABCD4O14678 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCD4O14678 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCD4O14678 AC133561.4-201ENST00000566112 224 ntBASIC19.67■□□□□ 0.74
ABCD4O14678 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCD4O14678 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD4O14678 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD4O14678 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD4O14678 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD4O14678 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCD4O14678 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD4O14678 AC009102.2-201ENST00000606772 1639 ntBASIC19.66■□□□□ 0.74
ABCD4O14678 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCD4O14678 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCD4O14678 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD4O14678 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD4O14678 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCD4O14678 AC135279.3-201ENST00000610945 1311 ntBASIC19.66■□□□□ 0.74
ABCD4O14678 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD4O14678 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD4O14678 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD4O14678 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ABCD4O14678 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD4O14678 DUX4L19-201ENST00000557448 1267 ntBASIC19.65■□□□□ 0.74
ABCD4O14678 AC092171.4-201ENST00000609130 632 ntBASIC19.65■□□□□ 0.74
ABCD4O14678 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCD4O14678 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD4O14678 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD4O14678 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ABCD4O14678 ALDH1A3-203ENST00000557963 1670 ntBASIC19.65■□□□□ 0.74
ABCD4O14678 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
ABCD4O14678 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD4O14678 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.64■□□□□ 0.73
ABCD4O14678 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.64■□□□□ 0.73
ABCD4O14678 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD4O14678 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.64■□□□□ 0.73
ABCD4O14678 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.64■□□□□ 0.73
ABCD4O14678 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD4O14678 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD4O14678 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD4O14678 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD4O14678 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ABCD4O14678 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD4O14678 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.63■□□□□ 0.73
ABCD4O14678 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD4O14678 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD4O14678 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD4O14678 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD4O14678 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD4O14678 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD4O14678 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.62■□□□□ 0.73
ABCD4O14678 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD4O14678 SYT6-210ENST00000641643 1587 ntBASIC19.62■□□□□ 0.73
ABCD4O14678 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ABCD4O14678 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.62■□□□□ 0.73
ABCD4O14678 AC024257.2-201ENST00000549699 147 ntBASIC19.62■□□□□ 0.73
ABCD4O14678 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ABCD4O14678 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ABCD4O14678 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD4O14678 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.62■□□□□ 0.73
ABCD4O14678 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD4O14678 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.62■□□□□ 0.73
ABCD4O14678 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD4O14678 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ABCD4O14678 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ABCD4O14678 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD4O14678 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD4O14678 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD4O14678 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD4O14678 AC099791.2-201ENST00000605725 427 ntBASIC19.61■□□□□ 0.73
ABCD4O14678 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD4O14678 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD4O14678 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ABCD4O14678 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD4O14678 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
ABCD4O14678 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ABCD4O14678 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCD4O14678 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCD4O14678 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms