Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CGB1A6NKQ9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CGB1A6NKQ9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.87■□□□□ 0.45
CGB1A6NKQ9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CGB1A6NKQ9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 AC021242.3-201ENST00000607598 1377 ntBASIC17.85■□□□□ 0.45
CGB1A6NKQ9 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CGB1A6NKQ9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 AC233723.2-201ENST00000623798 2106 ntBASIC17.84■□□□□ 0.45
CGB1A6NKQ9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CGB1A6NKQ9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.83■□□□□ 0.45
CGB1A6NKQ9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CGB1A6NKQ9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CGB1A6NKQ9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.83■□□□□ 0.45
CGB1A6NKQ9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CGB1A6NKQ9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.83■□□□□ 0.44
CGB1A6NKQ9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CGB1A6NKQ9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.83■□□□□ 0.44
CGB1A6NKQ9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CGB1A6NKQ9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CGB1A6NKQ9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CGB1A6NKQ9 AC079834.2-201ENST00000609776 1949 ntBASIC17.82■□□□□ 0.44
CGB1A6NKQ9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CGB1A6NKQ9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CGB1A6NKQ9 AL353803.4-201ENST00000565882 1934 ntBASIC17.81■□□□□ 0.44
CGB1A6NKQ9 AL117328.2-201ENST00000624617 1940 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms