Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.53■■□□□ 1.36
TCRBV5S1A1TA0A578 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV5S1A1TA0A578 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV5S1A1TA0A578 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV5S1A1TA0A578 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV5S1A1TA0A578 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCRBV5S1A1TA0A578 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.53■■□□□ 1.36
TCRBV5S1A1TA0A578 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 MIR6724-1-201ENST00000616420 92 ntBASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 MIR6724-2-201ENST00000616483 92 ntBASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 MIR6724-4-201ENST00000617390 92 ntBASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 MIR6724-3-201ENST00000622482 92 ntBASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.52■■□□□ 1.36
TCRBV5S1A1TA0A578 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TCRBV5S1A1TA0A578 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TCRBV5S1A1TA0A578 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
TCRBV5S1A1TA0A578 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TCRBV5S1A1TA0A578 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TCRBV5S1A1TA0A578 C1orf229-201ENST00000623686 2258 ntBASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TCRBV5S1A1TA0A578 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.49■■□□□ 1.35
TCRBV5S1A1TA0A578 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TCRBV5S1A1TA0A578 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TCRBV5S1A1TA0A578 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TCRBV5S1A1TA0A578 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TCRBV5S1A1TA0A578 FP325331.1-202ENST00000623531 1380 ntBASIC23.49■■□□□ 1.35
TCRBV5S1A1TA0A578 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.49■■□□□ 1.35
TCRBV5S1A1TA0A578 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 C17orf82-201ENST00000623772 1530 ntBASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TCRBV5S1A1TA0A578 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 KRT16P3-201ENST00000439127 1283 ntBASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
TCRBV5S1A1TA0A578 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 LINC01529-204ENST00000636474 1715 ntBASIC23.46■■□□□ 1.35
TCRBV5S1A1TA0A578 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TCRBV5S1A1TA0A578 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.45■■□□□ 1.34
TCRBV5S1A1TA0A578 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.45■■□□□ 1.34
TCRBV5S1A1TA0A578 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TCRBV5S1A1TA0A578 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.45■■□□□ 1.34
TCRBV5S1A1TA0A578 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.45■■□□□ 1.34
TCRBV5S1A1TA0A578 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TCRBV5S1A1TA0A578 DUX4L4-201ENST00000566884 1269 ntBASIC23.45■■□□□ 1.34
TCRBV5S1A1TA0A578 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
TCRBV5S1A1TA0A578 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms