Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 AC099791.1-201ENST00000416440 715 ntBASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CENPVL3A0A0U1RRI6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.21■□□□□ 0.5
CENPVL3A0A0U1RRI6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 AC144652.1-201ENST00000609974 1624 ntBASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 DUX4L4-201ENST00000566884 1269 ntBASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 AC233992.3-201ENST00000607491 485 ntBASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CENPVL3A0A0U1RRI6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 BX842568.3-201ENST00000418104 571 ntBASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 ABCB10P4-201ENST00000566803 2184 ntBASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.19■□□□□ 0.5
CENPVL3A0A0U1RRI6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 LINC01529-204ENST00000636474 1715 ntBASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 AL499627.2-201ENST00000606283 725 ntBASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.18■□□□□ 0.5
CENPVL3A0A0U1RRI6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 AC133637.1-201ENST00000624115 1537 ntBASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.17■□□□□ 0.5
CENPVL3A0A0U1RRI6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPVL3A0A0U1RRI6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.16■□□□□ 0.5
CENPVL3A0A0U1RRI6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CENPVL3A0A0U1RRI6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPVL3A0A0U1RRI6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPVL3A0A0U1RRI6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.16■□□□□ 0.5
CENPVL3A0A0U1RRI6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CENPVL3A0A0U1RRI6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPVL3A0A0U1RRI6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CENPVL3A0A0U1RRI6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CENPVL3A0A0U1RRI6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CENPVL3A0A0U1RRI6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.14■□□□□ 0.49
CENPVL3A0A0U1RRI6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPVL3A0A0U1RRI6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPVL3A0A0U1RRI6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPVL3A0A0U1RRI6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPVL3A0A0U1RRI6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPVL3A0A0U1RRI6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 459.8 ms