Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGHV4-28A0A0C4DH34 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGHV4-28A0A0C4DH34 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC142381.2-201ENST00000566120 298 ntBASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 MIR4767-201ENST00000582827 78 ntBASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 AL138724.1-201ENST00000606771 1088 ntBASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC011298.3-201ENST00000615796 283 ntBASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC093323.1-202ENST00000635031 2045 ntBASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
IGHV4-28A0A0C4DH34 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 EDA-201ENST00000338901 1233 ntBASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 MIR3181-201ENST00000578512 73 ntBASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 pRNA.6-201ENST00000610482 90 ntBASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 pRNA.5-201ENST00000612139 90 ntBASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 pRNA.11-201ENST00000618423 90 ntBASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 pRNA.13-201ENST00000619112 90 ntBASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.13■□□□□ 0.17
IGHV4-28A0A0C4DH34 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 AL355001.2-201ENST00000620617 1191 ntBASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IGHV4-28A0A0C4DH34 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IGHV4-28A0A0C4DH34 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGHV4-28A0A0C4DH34 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms