Protein–RNA interactions for Protein: Q9R226

Khdrbs3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdrbs3Q9R226 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Khdrbs3Q9R226 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Khdrbs3Q9R226 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Khdrbs3Q9R226 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Khdrbs3Q9R226 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Khdrbs3Q9R226 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Khdrbs3Q9R226 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Khdrbs3Q9R226 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Khdrbs3Q9R226 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.51■■□□□ 1.35
Khdrbs3Q9R226 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Khdrbs3Q9R226 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Khdrbs3Q9R226 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Khdrbs3Q9R226 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Khdrbs3Q9R226 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Khdrbs3Q9R226 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Khdrbs3Q9R226 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Khdrbs3Q9R226 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Khdrbs3Q9R226 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.41■■□□□ 1.34
Khdrbs3Q9R226 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.41■■□□□ 1.34
Khdrbs3Q9R226 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Khdrbs3Q9R226 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Khdrbs3Q9R226 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
Khdrbs3Q9R226 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Khdrbs3Q9R226 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Khdrbs3Q9R226 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Khdrbs3Q9R226 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Khdrbs3Q9R226 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.36■■□□□ 1.33
Khdrbs3Q9R226 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Khdrbs3Q9R226 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Khdrbs3Q9R226 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Khdrbs3Q9R226 Mipep-204ENSMUST00000225043 1548 ntBASIC23.35■■□□□ 1.33
Khdrbs3Q9R226 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Khdrbs3Q9R226 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Khdrbs3Q9R226 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.33■■□□□ 1.33
Khdrbs3Q9R226 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Khdrbs3Q9R226 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.32■■□□□ 1.32
Khdrbs3Q9R226 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Khdrbs3Q9R226 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.31■■□□□ 1.32
Khdrbs3Q9R226 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Khdrbs3Q9R226 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Khdrbs3Q9R226 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Khdrbs3Q9R226 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Khdrbs3Q9R226 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Khdrbs3Q9R226 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Khdrbs3Q9R226 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Khdrbs3Q9R226 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Khdrbs3Q9R226 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Khdrbs3Q9R226 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.25■■□□□ 1.31
Khdrbs3Q9R226 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.25■■□□□ 1.31
Khdrbs3Q9R226 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Khdrbs3Q9R226 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Khdrbs3Q9R226 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.21■■□□□ 1.31
Khdrbs3Q9R226 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Khdrbs3Q9R226 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.21■■□□□ 1.31
Khdrbs3Q9R226 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.2■■□□□ 1.3
Khdrbs3Q9R226 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Khdrbs3Q9R226 Gm27322-201ENSMUST00000184007 104 ntBASIC23.19■■□□□ 1.3
Khdrbs3Q9R226 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Khdrbs3Q9R226 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Khdrbs3Q9R226 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Khdrbs3Q9R226 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Khdrbs3Q9R226 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Khdrbs3Q9R226 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Khdrbs3Q9R226 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Khdrbs3Q9R226 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Khdrbs3Q9R226 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Khdrbs3Q9R226 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Khdrbs3Q9R226 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.13■■□□□ 1.29
Khdrbs3Q9R226 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
Khdrbs3Q9R226 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Khdrbs3Q9R226 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Khdrbs3Q9R226 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Khdrbs3Q9R226 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Khdrbs3Q9R226 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Khdrbs3Q9R226 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Khdrbs3Q9R226 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.09■■□□□ 1.29
Khdrbs3Q9R226 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Khdrbs3Q9R226 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Khdrbs3Q9R226 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Khdrbs3Q9R226 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Khdrbs3Q9R226 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Khdrbs3Q9R226 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Khdrbs3Q9R226 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Khdrbs3Q9R226 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Khdrbs3Q9R226 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Khdrbs3Q9R226 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Khdrbs3Q9R226 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
Khdrbs3Q9R226 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Khdrbs3Q9R226 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Khdrbs3Q9R226 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Khdrbs3Q9R226 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Khdrbs3Q9R226 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Khdrbs3Q9R226 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Khdrbs3Q9R226 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Khdrbs3Q9R226 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
Khdrbs3Q9R226 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Khdrbs3Q9R226 Gm26115-201ENSMUST00000175605 87 ntBASIC22.95■■□□□ 1.26
Khdrbs3Q9R226 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Khdrbs3Q9R226 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Khdrbs3Q9R226 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms