Protein–RNA interactions for Protein: Q9R171

Cbln1, Cerebellin-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbln1Q9R171 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cbln1Q9R171 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cbln1Q9R171 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cbln1Q9R171 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cbln1Q9R171 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.39■□□□□ 0.85
Cbln1Q9R171 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cbln1Q9R171 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cbln1Q9R171 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Cbln1Q9R171 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cbln1Q9R171 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.37■□□□□ 0.85
Cbln1Q9R171 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cbln1Q9R171 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cbln1Q9R171 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cbln1Q9R171 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cbln1Q9R171 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cbln1Q9R171 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cbln1Q9R171 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cbln1Q9R171 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cbln1Q9R171 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cbln1Q9R171 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cbln1Q9R171 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cbln1Q9R171 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cbln1Q9R171 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cbln1Q9R171 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cbln1Q9R171 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbln1Q9R171 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cbln1Q9R171 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbln1Q9R171 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbln1Q9R171 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.2■□□□□ 0.82
Cbln1Q9R171 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cbln1Q9R171 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.18■□□□□ 0.82
Cbln1Q9R171 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.18■□□□□ 0.82
Cbln1Q9R171 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cbln1Q9R171 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.18■□□□□ 0.82
Cbln1Q9R171 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cbln1Q9R171 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cbln1Q9R171 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cbln1Q9R171 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.16■□□□□ 0.82
Cbln1Q9R171 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cbln1Q9R171 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cbln1Q9R171 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.14■□□□□ 0.81
Cbln1Q9R171 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cbln1Q9R171 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cbln1Q9R171 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cbln1Q9R171 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cbln1Q9R171 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.13■□□□□ 0.81
Cbln1Q9R171 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cbln1Q9R171 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cbln1Q9R171 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cbln1Q9R171 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cbln1Q9R171 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cbln1Q9R171 Mipep-204ENSMUST00000225043 1548 ntBASIC20.11■□□□□ 0.81
Cbln1Q9R171 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cbln1Q9R171 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cbln1Q9R171 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cbln1Q9R171 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cbln1Q9R171 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cbln1Q9R171 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cbln1Q9R171 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cbln1Q9R171 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cbln1Q9R171 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cbln1Q9R171 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cbln1Q9R171 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cbln1Q9R171 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cbln1Q9R171 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cbln1Q9R171 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cbln1Q9R171 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cbln1Q9R171 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cbln1Q9R171 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cbln1Q9R171 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
Cbln1Q9R171 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cbln1Q9R171 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cbln1Q9R171 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cbln1Q9R171 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.95■□□□□ 0.78
Cbln1Q9R171 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cbln1Q9R171 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
Cbln1Q9R171 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cbln1Q9R171 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cbln1Q9R171 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.92■□□□□ 0.78
Cbln1Q9R171 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cbln1Q9R171 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cbln1Q9R171 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cbln1Q9R171 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cbln1Q9R171 Gm24804-201ENSMUST00000174982 85 ntBASIC19.89■□□□□ 0.77
Cbln1Q9R171 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cbln1Q9R171 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cbln1Q9R171 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cbln1Q9R171 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cbln1Q9R171 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cbln1Q9R171 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cbln1Q9R171 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cbln1Q9R171 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cbln1Q9R171 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cbln1Q9R171 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cbln1Q9R171 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cbln1Q9R171 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cbln1Q9R171 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cbln1Q9R171 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.84■□□□□ 0.77
Cbln1Q9R171 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cbln1Q9R171 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms