Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Clcn2Q9R0A1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Clcn2Q9R0A1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Clcn2Q9R0A1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.6■■□□□ 1.85
Clcn2Q9R0A1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
Clcn2Q9R0A1 Gm27322-201ENSMUST00000184007 104 ntBASIC26.58■■□□□ 1.85
Clcn2Q9R0A1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.57■■□□□ 1.84
Clcn2Q9R0A1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Clcn2Q9R0A1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.55■■□□□ 1.84
Clcn2Q9R0A1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Clcn2Q9R0A1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Clcn2Q9R0A1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Clcn2Q9R0A1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Clcn2Q9R0A1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Clcn2Q9R0A1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Clcn2Q9R0A1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Clcn2Q9R0A1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Clcn2Q9R0A1 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.47■■□□□ 1.83
Clcn2Q9R0A1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Clcn2Q9R0A1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.44■■□□□ 1.82
Clcn2Q9R0A1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Clcn2Q9R0A1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Clcn2Q9R0A1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Clcn2Q9R0A1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Clcn2Q9R0A1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Clcn2Q9R0A1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Clcn2Q9R0A1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Clcn2Q9R0A1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Clcn2Q9R0A1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Clcn2Q9R0A1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.36■■□□□ 1.81
Clcn2Q9R0A1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Clcn2Q9R0A1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Clcn2Q9R0A1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.33■■□□□ 1.81
Clcn2Q9R0A1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Clcn2Q9R0A1 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.28■■□□□ 1.8
Clcn2Q9R0A1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Clcn2Q9R0A1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Clcn2Q9R0A1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Clcn2Q9R0A1 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.25■■□□□ 1.79
Clcn2Q9R0A1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Clcn2Q9R0A1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Clcn2Q9R0A1 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.24■■□□□ 1.79
Clcn2Q9R0A1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Clcn2Q9R0A1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Clcn2Q9R0A1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Clcn2Q9R0A1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Clcn2Q9R0A1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Clcn2Q9R0A1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Clcn2Q9R0A1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Clcn2Q9R0A1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Clcn2Q9R0A1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Clcn2Q9R0A1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Clcn2Q9R0A1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Clcn2Q9R0A1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Clcn2Q9R0A1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Clcn2Q9R0A1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Clcn2Q9R0A1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Clcn2Q9R0A1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.12■■□□□ 1.77
Clcn2Q9R0A1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Clcn2Q9R0A1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.1■■□□□ 1.77
Clcn2Q9R0A1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Clcn2Q9R0A1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.1■■□□□ 1.77
Clcn2Q9R0A1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Clcn2Q9R0A1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Clcn2Q9R0A1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Clcn2Q9R0A1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Clcn2Q9R0A1 Gm24804-201ENSMUST00000174982 85 ntBASIC26.08■■□□□ 1.77
Clcn2Q9R0A1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Clcn2Q9R0A1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Clcn2Q9R0A1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Clcn2Q9R0A1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Clcn2Q9R0A1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Clcn2Q9R0A1 Mipep-204ENSMUST00000225043 1548 ntBASIC26.03■■□□□ 1.76
Clcn2Q9R0A1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Clcn2Q9R0A1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Clcn2Q9R0A1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Clcn2Q9R0A1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Clcn2Q9R0A1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Clcn2Q9R0A1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Clcn2Q9R0A1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Clcn2Q9R0A1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Clcn2Q9R0A1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Clcn2Q9R0A1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Clcn2Q9R0A1 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.95■■□□□ 1.75
Clcn2Q9R0A1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Clcn2Q9R0A1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.95■■□□□ 1.74
Clcn2Q9R0A1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Clcn2Q9R0A1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Clcn2Q9R0A1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Clcn2Q9R0A1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Clcn2Q9R0A1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Clcn2Q9R0A1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Clcn2Q9R0A1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Clcn2Q9R0A1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.89■■□□□ 1.74
Clcn2Q9R0A1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
Clcn2Q9R0A1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Clcn2Q9R0A1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.88■■□□□ 1.73
Clcn2Q9R0A1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Clcn2Q9R0A1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Clcn2Q9R0A1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms