Protein–RNA interactions for Protein: Q9QXK9

Sh2d2a, SH2 domain-containing protein 2A, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d2aQ9QXK9 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.7■■□□□ 1.06
Sh2d2aQ9QXK9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d2aQ9QXK9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Sh2d2aQ9QXK9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sh2d2aQ9QXK9 Gm27322-201ENSMUST00000184007 104 ntBASIC21.67■■□□□ 1.06
Sh2d2aQ9QXK9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d2aQ9QXK9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d2aQ9QXK9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
Sh2d2aQ9QXK9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sh2d2aQ9QXK9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d2aQ9QXK9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d2aQ9QXK9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sh2d2aQ9QXK9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.61■■□□□ 1.05
Sh2d2aQ9QXK9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sh2d2aQ9QXK9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh2d2aQ9QXK9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sh2d2aQ9QXK9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh2d2aQ9QXK9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh2d2aQ9QXK9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2d2aQ9QXK9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.52■■□□□ 1.04
Sh2d2aQ9QXK9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sh2d2aQ9QXK9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh2d2aQ9QXK9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.49■■□□□ 1.03
Sh2d2aQ9QXK9 Mipep-204ENSMUST00000225043 1548 ntBASIC21.49■■□□□ 1.03
Sh2d2aQ9QXK9 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.48■■□□□ 1.03
Sh2d2aQ9QXK9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Sh2d2aQ9QXK9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh2d2aQ9QXK9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh2d2aQ9QXK9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh2d2aQ9QXK9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh2d2aQ9QXK9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh2d2aQ9QXK9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh2d2aQ9QXK9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh2d2aQ9QXK9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Sh2d2aQ9QXK9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh2d2aQ9QXK9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh2d2aQ9QXK9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.4■■□□□ 1.02
Sh2d2aQ9QXK9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Sh2d2aQ9QXK9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Sh2d2aQ9QXK9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh2d2aQ9QXK9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh2d2aQ9QXK9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh2d2aQ9QXK9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d2aQ9QXK9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d2aQ9QXK9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh2d2aQ9QXK9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh2d2aQ9QXK9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh2d2aQ9QXK9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sh2d2aQ9QXK9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh2d2aQ9QXK9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh2d2aQ9QXK9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh2d2aQ9QXK9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d2aQ9QXK9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d2aQ9QXK9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.25■□□□□ 0.99
Sh2d2aQ9QXK9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d2aQ9QXK9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d2aQ9QXK9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d2aQ9QXK9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sh2d2aQ9QXK9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.23■□□□□ 0.99
Sh2d2aQ9QXK9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d2aQ9QXK9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d2aQ9QXK9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d2aQ9QXK9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d2aQ9QXK9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sh2d2aQ9QXK9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d2aQ9QXK9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d2aQ9QXK9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d2aQ9QXK9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d2aQ9QXK9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d2aQ9QXK9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d2aQ9QXK9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Sh2d2aQ9QXK9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d2aQ9QXK9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sh2d2aQ9QXK9 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.16■□□□□ 0.98
Sh2d2aQ9QXK9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sh2d2aQ9QXK9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Sh2d2aQ9QXK9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d2aQ9QXK9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh2d2aQ9QXK9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh2d2aQ9QXK9 Gm24804-201ENSMUST00000174982 85 ntBASIC21.13■□□□□ 0.97
Sh2d2aQ9QXK9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Sh2d2aQ9QXK9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d2aQ9QXK9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d2aQ9QXK9 Zxda-201ENSMUST00000117281 2621 ntBASIC21.09■□□□□ 0.97
Sh2d2aQ9QXK9 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.09■□□□□ 0.97
Sh2d2aQ9QXK9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sh2d2aQ9QXK9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh2d2aQ9QXK9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Sh2d2aQ9QXK9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
Sh2d2aQ9QXK9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh2d2aQ9QXK9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh2d2aQ9QXK9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d2aQ9QXK9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d2aQ9QXK9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d2aQ9QXK9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
Sh2d2aQ9QXK9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.02■□□□□ 0.96
Sh2d2aQ9QXK9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh2d2aQ9QXK9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Sh2d2aQ9QXK9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh2d2aQ9QXK9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms