Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ssmem1Q9D9Y8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.66■■□□□ 1.22
Ssmem1Q9D9Y8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ssmem1Q9D9Y8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ssmem1Q9D9Y8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ssmem1Q9D9Y8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Ssmem1Q9D9Y8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ssmem1Q9D9Y8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ssmem1Q9D9Y8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ssmem1Q9D9Y8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ssmem1Q9D9Y8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ssmem1Q9D9Y8 Peli2-204ENSMUST00000226513 1320 ntBASIC22.6■■□□□ 1.21
Ssmem1Q9D9Y8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ssmem1Q9D9Y8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ssmem1Q9D9Y8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.59■■□□□ 1.21
Ssmem1Q9D9Y8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ssmem1Q9D9Y8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ssmem1Q9D9Y8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.58■■□□□ 1.21
Ssmem1Q9D9Y8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ssmem1Q9D9Y8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Ssmem1Q9D9Y8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ssmem1Q9D9Y8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssmem1Q9D9Y8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssmem1Q9D9Y8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssmem1Q9D9Y8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ssmem1Q9D9Y8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ssmem1Q9D9Y8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ssmem1Q9D9Y8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ssmem1Q9D9Y8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ssmem1Q9D9Y8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ssmem1Q9D9Y8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ssmem1Q9D9Y8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Ssmem1Q9D9Y8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.47■■□□□ 1.19
Ssmem1Q9D9Y8 Gm16148-201ENSMUST00000119653 893 ntBASIC22.47■■□□□ 1.19
Ssmem1Q9D9Y8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ssmem1Q9D9Y8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Ssmem1Q9D9Y8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
Ssmem1Q9D9Y8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ssmem1Q9D9Y8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ssmem1Q9D9Y8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ssmem1Q9D9Y8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssmem1Q9D9Y8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ssmem1Q9D9Y8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ssmem1Q9D9Y8 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.38■■□□□ 1.17
Ssmem1Q9D9Y8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ssmem1Q9D9Y8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ssmem1Q9D9Y8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ssmem1Q9D9Y8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ssmem1Q9D9Y8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssmem1Q9D9Y8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ssmem1Q9D9Y8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ssmem1Q9D9Y8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ssmem1Q9D9Y8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ssmem1Q9D9Y8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.29■■□□□ 1.16
Ssmem1Q9D9Y8 Zfp131-205ENSMUST00000223812 663 ntBASIC22.29■■□□□ 1.16
Ssmem1Q9D9Y8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ssmem1Q9D9Y8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.28■■□□□ 1.16
Ssmem1Q9D9Y8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ssmem1Q9D9Y8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ssmem1Q9D9Y8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ssmem1Q9D9Y8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ssmem1Q9D9Y8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Ssmem1Q9D9Y8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ssmem1Q9D9Y8 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.24■■□□□ 1.15
Ssmem1Q9D9Y8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ssmem1Q9D9Y8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ssmem1Q9D9Y8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Ssmem1Q9D9Y8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.22■■□□□ 1.15
Ssmem1Q9D9Y8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
Ssmem1Q9D9Y8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.21■■□□□ 1.15
Ssmem1Q9D9Y8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ssmem1Q9D9Y8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ssmem1Q9D9Y8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Ssmem1Q9D9Y8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.17■■□□□ 1.14
Ssmem1Q9D9Y8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ssmem1Q9D9Y8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ssmem1Q9D9Y8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ssmem1Q9D9Y8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ssmem1Q9D9Y8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ssmem1Q9D9Y8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
Ssmem1Q9D9Y8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.13■■□□□ 1.13
Ssmem1Q9D9Y8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ssmem1Q9D9Y8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ssmem1Q9D9Y8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ssmem1Q9D9Y8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ssmem1Q9D9Y8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.1■■□□□ 1.13
Ssmem1Q9D9Y8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ssmem1Q9D9Y8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ssmem1Q9D9Y8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ssmem1Q9D9Y8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ssmem1Q9D9Y8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ssmem1Q9D9Y8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.06■■□□□ 1.12
Ssmem1Q9D9Y8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ssmem1Q9D9Y8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ssmem1Q9D9Y8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.05■■□□□ 1.12
Ssmem1Q9D9Y8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.05■■□□□ 1.12
Ssmem1Q9D9Y8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ssmem1Q9D9Y8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Ssmem1Q9D9Y8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ssmem1Q9D9Y8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms