Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Pcdh18Q8VHR0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdh18Q8VHR0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Pcdh18Q8VHR0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdh18Q8VHR0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdh18Q8VHR0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdh18Q8VHR0 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.79■■□□□ 1.56
Pcdh18Q8VHR0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.78■■□□□ 1.56
Pcdh18Q8VHR0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.74■■□□□ 1.55
Pcdh18Q8VHR0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh18Q8VHR0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Pcdh18Q8VHR0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdh18Q8VHR0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Pcdh18Q8VHR0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Pcdh18Q8VHR0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh18Q8VHR0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh18Q8VHR0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh18Q8VHR0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh18Q8VHR0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh18Q8VHR0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh18Q8VHR0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh18Q8VHR0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh18Q8VHR0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.65■■□□□ 1.54
Pcdh18Q8VHR0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.64■■□□□ 1.54
Pcdh18Q8VHR0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdh18Q8VHR0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh18Q8VHR0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh18Q8VHR0 Gm25262-201ENSMUST00000174934 133 ntBASIC24.62■■□□□ 1.53
Pcdh18Q8VHR0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh18Q8VHR0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.61■■□□□ 1.53
Pcdh18Q8VHR0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh18Q8VHR0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh18Q8VHR0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdh18Q8VHR0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh18Q8VHR0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Pcdh18Q8VHR0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdh18Q8VHR0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdh18Q8VHR0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
Pcdh18Q8VHR0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdh18Q8VHR0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdh18Q8VHR0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdh18Q8VHR0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdh18Q8VHR0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh18Q8VHR0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh18Q8VHR0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdh18Q8VHR0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh18Q8VHR0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh18Q8VHR0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh18Q8VHR0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh18Q8VHR0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh18Q8VHR0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh18Q8VHR0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdh18Q8VHR0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdh18Q8VHR0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdh18Q8VHR0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Pcdh18Q8VHR0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh18Q8VHR0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdh18Q8VHR0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdh18Q8VHR0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdh18Q8VHR0 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.34■■□□□ 1.49
Pcdh18Q8VHR0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdh18Q8VHR0 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.32■■□□□ 1.48
Pcdh18Q8VHR0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh18Q8VHR0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh18Q8VHR0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh18Q8VHR0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh18Q8VHR0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Pcdh18Q8VHR0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Pcdh18Q8VHR0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh18Q8VHR0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh18Q8VHR0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh18Q8VHR0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.24■■□□□ 1.47
Pcdh18Q8VHR0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh18Q8VHR0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdh18Q8VHR0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.22■■□□□ 1.47
Pcdh18Q8VHR0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdh18Q8VHR0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdh18Q8VHR0 Mipep-204ENSMUST00000225043 1548 ntBASIC24.2■■□□□ 1.46
Pcdh18Q8VHR0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh18Q8VHR0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pcdh18Q8VHR0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdh18Q8VHR0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh18Q8VHR0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh18Q8VHR0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh18Q8VHR0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh18Q8VHR0 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.15■■□□□ 1.46
Pcdh18Q8VHR0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh18Q8VHR0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Pcdh18Q8VHR0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdh18Q8VHR0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.14■■□□□ 1.45
Pcdh18Q8VHR0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdh18Q8VHR0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdh18Q8VHR0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh18Q8VHR0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Pcdh18Q8VHR0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.09■■□□□ 1.45
Pcdh18Q8VHR0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdh18Q8VHR0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
Pcdh18Q8VHR0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdh18Q8VHR0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh18Q8VHR0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms