Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rcc1Q8VE37 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rcc1Q8VE37 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rcc1Q8VE37 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rcc1Q8VE37 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.29■■□□□ 1.16
Rcc1Q8VE37 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rcc1Q8VE37 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rcc1Q8VE37 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Rcc1Q8VE37 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Rcc1Q8VE37 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rcc1Q8VE37 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.23■■□□□ 1.15
Rcc1Q8VE37 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rcc1Q8VE37 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rcc1Q8VE37 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Rcc1Q8VE37 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rcc1Q8VE37 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.21■■□□□ 1.15
Rcc1Q8VE37 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.21■■□□□ 1.15
Rcc1Q8VE37 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rcc1Q8VE37 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rcc1Q8VE37 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rcc1Q8VE37 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rcc1Q8VE37 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.17■■□□□ 1.14
Rcc1Q8VE37 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rcc1Q8VE37 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rcc1Q8VE37 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rcc1Q8VE37 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.14■■□□□ 1.13
Rcc1Q8VE37 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rcc1Q8VE37 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rcc1Q8VE37 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Rcc1Q8VE37 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.1■■□□□ 1.13
Rcc1Q8VE37 Gm27322-201ENSMUST00000184007 104 ntBASIC22.09■■□□□ 1.13
Rcc1Q8VE37 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rcc1Q8VE37 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rcc1Q8VE37 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rcc1Q8VE37 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.08■■□□□ 1.13
Rcc1Q8VE37 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rcc1Q8VE37 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
Rcc1Q8VE37 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Rcc1Q8VE37 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rcc1Q8VE37 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rcc1Q8VE37 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.03■■□□□ 1.12
Rcc1Q8VE37 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rcc1Q8VE37 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.02■■□□□ 1.12
Rcc1Q8VE37 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rcc1Q8VE37 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Rcc1Q8VE37 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rcc1Q8VE37 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rcc1Q8VE37 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rcc1Q8VE37 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rcc1Q8VE37 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rcc1Q8VE37 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Rcc1Q8VE37 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rcc1Q8VE37 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rcc1Q8VE37 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rcc1Q8VE37 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.94■■□□□ 1.1
Rcc1Q8VE37 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rcc1Q8VE37 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rcc1Q8VE37 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Rcc1Q8VE37 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rcc1Q8VE37 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rcc1Q8VE37 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Rcc1Q8VE37 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rcc1Q8VE37 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rcc1Q8VE37 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.88■■□□□ 1.09
Rcc1Q8VE37 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rcc1Q8VE37 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rcc1Q8VE37 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rcc1Q8VE37 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rcc1Q8VE37 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rcc1Q8VE37 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rcc1Q8VE37 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rcc1Q8VE37 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rcc1Q8VE37 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rcc1Q8VE37 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rcc1Q8VE37 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.83■■□□□ 1.09
Rcc1Q8VE37 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rcc1Q8VE37 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rcc1Q8VE37 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rcc1Q8VE37 Gm26115-201ENSMUST00000175605 87 ntBASIC21.82■■□□□ 1.08
Rcc1Q8VE37 Gm8109-201ENSMUST00000194076 746 ntBASIC21.81■■□□□ 1.08
Rcc1Q8VE37 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rcc1Q8VE37 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rcc1Q8VE37 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rcc1Q8VE37 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rcc1Q8VE37 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rcc1Q8VE37 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rcc1Q8VE37 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rcc1Q8VE37 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rcc1Q8VE37 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rcc1Q8VE37 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Rcc1Q8VE37 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rcc1Q8VE37 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rcc1Q8VE37 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rcc1Q8VE37 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
Rcc1Q8VE37 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rcc1Q8VE37 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rcc1Q8VE37 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rcc1Q8VE37 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rcc1Q8VE37 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rcc1Q8VE37 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms