Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.61■■■□□ 2.17
Sgms1Q8VCQ6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Sgms1Q8VCQ6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Sgms1Q8VCQ6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Sgms1Q8VCQ6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.55■■■□□ 2.16
Sgms1Q8VCQ6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Sgms1Q8VCQ6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Sgms1Q8VCQ6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Sgms1Q8VCQ6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Sgms1Q8VCQ6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Sgms1Q8VCQ6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Sgms1Q8VCQ6 Gm27322-201ENSMUST00000184007 104 ntBASIC28.49■■■□□ 2.15
Sgms1Q8VCQ6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Sgms1Q8VCQ6 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.44■■■□□ 2.14
Sgms1Q8VCQ6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Sgms1Q8VCQ6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Sgms1Q8VCQ6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Sgms1Q8VCQ6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sgms1Q8VCQ6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Sgms1Q8VCQ6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sgms1Q8VCQ6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sgms1Q8VCQ6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.32■■■□□ 2.12
Sgms1Q8VCQ6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sgms1Q8VCQ6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Sgms1Q8VCQ6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Sgms1Q8VCQ6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Sgms1Q8VCQ6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
Sgms1Q8VCQ6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Sgms1Q8VCQ6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Sgms1Q8VCQ6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sgms1Q8VCQ6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sgms1Q8VCQ6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sgms1Q8VCQ6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Sgms1Q8VCQ6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.22■■■□□ 2.11
Sgms1Q8VCQ6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.22■■■□□ 2.11
Sgms1Q8VCQ6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Sgms1Q8VCQ6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Sgms1Q8VCQ6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sgms1Q8VCQ6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
Sgms1Q8VCQ6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.18■■■□□ 2.1
Sgms1Q8VCQ6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Sgms1Q8VCQ6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sgms1Q8VCQ6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sgms1Q8VCQ6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sgms1Q8VCQ6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Sgms1Q8VCQ6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Sgms1Q8VCQ6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Sgms1Q8VCQ6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.1■■■□□ 2.09
Sgms1Q8VCQ6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Sgms1Q8VCQ6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sgms1Q8VCQ6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sgms1Q8VCQ6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sgms1Q8VCQ6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Sgms1Q8VCQ6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Sgms1Q8VCQ6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sgms1Q8VCQ6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Sgms1Q8VCQ6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.01■■■□□ 2.07
Sgms1Q8VCQ6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Sgms1Q8VCQ6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Sgms1Q8VCQ6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sgms1Q8VCQ6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sgms1Q8VCQ6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sgms1Q8VCQ6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.96■■■□□ 2.07
Sgms1Q8VCQ6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sgms1Q8VCQ6 Gm24804-201ENSMUST00000174982 85 ntBASIC27.95■■■□□ 2.06
Sgms1Q8VCQ6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Sgms1Q8VCQ6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sgms1Q8VCQ6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sgms1Q8VCQ6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Sgms1Q8VCQ6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.89■■■□□ 2.06
Sgms1Q8VCQ6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Sgms1Q8VCQ6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sgms1Q8VCQ6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sgms1Q8VCQ6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Sgms1Q8VCQ6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Sgms1Q8VCQ6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Sgms1Q8VCQ6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Sgms1Q8VCQ6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.84■■■□□ 2.05
Sgms1Q8VCQ6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Sgms1Q8VCQ6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Sgms1Q8VCQ6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Peli2-204ENSMUST00000226513 1320 ntBASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sgms1Q8VCQ6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Sgms1Q8VCQ6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.8■■■□□ 2.04
Sgms1Q8VCQ6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sgms1Q8VCQ6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sgms1Q8VCQ6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
Sgms1Q8VCQ6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.78■■■□□ 2.04
Sgms1Q8VCQ6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sgms1Q8VCQ6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Sgms1Q8VCQ6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Sgms1Q8VCQ6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sgms1Q8VCQ6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Sgms1Q8VCQ6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sgms1Q8VCQ6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Sgms1Q8VCQ6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.74■■■□□ 2.03
Sgms1Q8VCQ6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms