Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Vps39Q8R5L3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Vps39Q8R5L3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26■■□□□ 1.75
Vps39Q8R5L3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Vps39Q8R5L3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Vps39Q8R5L3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Vps39Q8R5L3 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.97■■□□□ 1.75
Vps39Q8R5L3 Gm27322-201ENSMUST00000184007 104 ntBASIC25.96■■□□□ 1.75
Vps39Q8R5L3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Vps39Q8R5L3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Vps39Q8R5L3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Vps39Q8R5L3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.92■■□□□ 1.74
Vps39Q8R5L3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.91■■□□□ 1.74
Vps39Q8R5L3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Vps39Q8R5L3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.9■■□□□ 1.74
Vps39Q8R5L3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Vps39Q8R5L3 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.89■■□□□ 1.74
Vps39Q8R5L3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.74
Vps39Q8R5L3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Vps39Q8R5L3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Vps39Q8R5L3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Vps39Q8R5L3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Vps39Q8R5L3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Vps39Q8R5L3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Vps39Q8R5L3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Vps39Q8R5L3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Vps39Q8R5L3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Vps39Q8R5L3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Vps39Q8R5L3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Vps39Q8R5L3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Vps39Q8R5L3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Vps39Q8R5L3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.77■■□□□ 1.72
Vps39Q8R5L3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Vps39Q8R5L3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.77■■□□□ 1.72
Vps39Q8R5L3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
Vps39Q8R5L3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.77■■□□□ 1.72
Vps39Q8R5L3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Vps39Q8R5L3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Vps39Q8R5L3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Vps39Q8R5L3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
Vps39Q8R5L3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Vps39Q8R5L3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Vps39Q8R5L3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Vps39Q8R5L3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Vps39Q8R5L3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Vps39Q8R5L3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Vps39Q8R5L3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Vps39Q8R5L3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Vps39Q8R5L3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Vps39Q8R5L3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Vps39Q8R5L3 Gm26115-201ENSMUST00000175605 87 ntBASIC25.63■■□□□ 1.69
Vps39Q8R5L3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Vps39Q8R5L3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Vps39Q8R5L3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Vps39Q8R5L3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Vps39Q8R5L3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Vps39Q8R5L3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Vps39Q8R5L3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vps39Q8R5L3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vps39Q8R5L3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vps39Q8R5L3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Vps39Q8R5L3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Vps39Q8R5L3 Gm8109-201ENSMUST00000194076 746 ntBASIC25.53■■□□□ 1.68
Vps39Q8R5L3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Vps39Q8R5L3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Vps39Q8R5L3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Vps39Q8R5L3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Vps39Q8R5L3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Vps39Q8R5L3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Vps39Q8R5L3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Vps39Q8R5L3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Vps39Q8R5L3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Vps39Q8R5L3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Vps39Q8R5L3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vps39Q8R5L3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Vps39Q8R5L3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.44■■□□□ 1.66
Vps39Q8R5L3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Vps39Q8R5L3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Vps39Q8R5L3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
Vps39Q8R5L3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Vps39Q8R5L3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Vps39Q8R5L3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Vps39Q8R5L3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Vps39Q8R5L3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Vps39Q8R5L3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Vps39Q8R5L3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Vps39Q8R5L3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.37■■□□□ 1.65
Vps39Q8R5L3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Vps39Q8R5L3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Vps39Q8R5L3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Vps39Q8R5L3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.36■■□□□ 1.65
Vps39Q8R5L3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
Vps39Q8R5L3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Vps39Q8R5L3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Vps39Q8R5L3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
Vps39Q8R5L3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
Vps39Q8R5L3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Vps39Q8R5L3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.31■■□□□ 1.64
Vps39Q8R5L3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Vps39Q8R5L3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms