Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Top1mtQ8R4U6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
Top1mtQ8R4U6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
Top1mtQ8R4U6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Top1mtQ8R4U6 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.5■■■□□ 2.63
Top1mtQ8R4U6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Top1mtQ8R4U6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Top1mtQ8R4U6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Top1mtQ8R4U6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Top1mtQ8R4U6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Top1mtQ8R4U6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Top1mtQ8R4U6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Top1mtQ8R4U6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Top1mtQ8R4U6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Top1mtQ8R4U6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Top1mtQ8R4U6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Top1mtQ8R4U6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Top1mtQ8R4U6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Top1mtQ8R4U6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Top1mtQ8R4U6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Top1mtQ8R4U6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Top1mtQ8R4U6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Top1mtQ8R4U6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Top1mtQ8R4U6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Top1mtQ8R4U6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
Top1mtQ8R4U6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Top1mtQ8R4U6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Top1mtQ8R4U6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Top1mtQ8R4U6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Top1mtQ8R4U6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Top1mtQ8R4U6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Top1mtQ8R4U6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Top1mtQ8R4U6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Top1mtQ8R4U6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Top1mtQ8R4U6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Top1mtQ8R4U6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Top1mtQ8R4U6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Top1mtQ8R4U6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Top1mtQ8R4U6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Top1mtQ8R4U6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.03■■■□□ 2.56
Top1mtQ8R4U6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Top1mtQ8R4U6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Top1mtQ8R4U6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Top1mtQ8R4U6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.01■■■□□ 2.55
Top1mtQ8R4U6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.98■■■□□ 2.55
Top1mtQ8R4U6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Top1mtQ8R4U6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Top1mtQ8R4U6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Top1mtQ8R4U6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.94■■■□□ 2.54
Top1mtQ8R4U6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Top1mtQ8R4U6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Top1mtQ8R4U6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
Top1mtQ8R4U6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.91■■■□□ 2.54
Top1mtQ8R4U6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
Top1mtQ8R4U6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Top1mtQ8R4U6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Top1mtQ8R4U6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.54
Top1mtQ8R4U6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.88■■■□□ 2.53
Top1mtQ8R4U6 Peli2-204ENSMUST00000226513 1320 ntBASIC30.88■■■□□ 2.53
Top1mtQ8R4U6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Top1mtQ8R4U6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Top1mtQ8R4U6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
Top1mtQ8R4U6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Top1mtQ8R4U6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.83■■■□□ 2.53
Top1mtQ8R4U6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Top1mtQ8R4U6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
Top1mtQ8R4U6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Top1mtQ8R4U6 Gm24804-201ENSMUST00000174982 85 ntBASIC30.76■■■□□ 2.51
Top1mtQ8R4U6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Top1mtQ8R4U6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Top1mtQ8R4U6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Top1mtQ8R4U6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.74■■■□□ 2.51
Top1mtQ8R4U6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Top1mtQ8R4U6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Top1mtQ8R4U6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Top1mtQ8R4U6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.71■■■□□ 2.51
Top1mtQ8R4U6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Top1mtQ8R4U6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Top1mtQ8R4U6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Top1mtQ8R4U6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Top1mtQ8R4U6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.69■■■□□ 2.5
Top1mtQ8R4U6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Top1mtQ8R4U6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Top1mtQ8R4U6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Top1mtQ8R4U6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Top1mtQ8R4U6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.66■■■□□ 2.5
Top1mtQ8R4U6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Top1mtQ8R4U6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.62■■■□□ 2.49
Top1mtQ8R4U6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Top1mtQ8R4U6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.61■■■□□ 2.49
Top1mtQ8R4U6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Top1mtQ8R4U6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Top1mtQ8R4U6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Top1mtQ8R4U6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Top1mtQ8R4U6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Top1mtQ8R4U6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Top1mtQ8R4U6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Top1mtQ8R4U6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Top1mtQ8R4U6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Top1mtQ8R4U6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms