Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Top1mtQ8R4U6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
Top1mtQ8R4U6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
Top1mtQ8R4U6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Top1mtQ8R4U6 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.5■■■□□ 2.63
Top1mtQ8R4U6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Top1mtQ8R4U6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Top1mtQ8R4U6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Top1mtQ8R4U6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Top1mtQ8R4U6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Top1mtQ8R4U6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Top1mtQ8R4U6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Top1mtQ8R4U6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Top1mtQ8R4U6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Top1mtQ8R4U6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Top1mtQ8R4U6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Top1mtQ8R4U6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Top1mtQ8R4U6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Top1mtQ8R4U6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Top1mtQ8R4U6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Top1mtQ8R4U6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Top1mtQ8R4U6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Top1mtQ8R4U6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Top1mtQ8R4U6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Top1mtQ8R4U6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
Top1mtQ8R4U6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Top1mtQ8R4U6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Top1mtQ8R4U6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Top1mtQ8R4U6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Top1mtQ8R4U6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Top1mtQ8R4U6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Top1mtQ8R4U6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Top1mtQ8R4U6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Top1mtQ8R4U6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Top1mtQ8R4U6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Top1mtQ8R4U6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Top1mtQ8R4U6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Top1mtQ8R4U6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Top1mtQ8R4U6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Top1mtQ8R4U6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.03■■■□□ 2.56
Top1mtQ8R4U6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Top1mtQ8R4U6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Top1mtQ8R4U6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Top1mtQ8R4U6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.01■■■□□ 2.55
Top1mtQ8R4U6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.98■■■□□ 2.55
Top1mtQ8R4U6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Top1mtQ8R4U6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Top1mtQ8R4U6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Top1mtQ8R4U6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.94■■■□□ 2.54
Top1mtQ8R4U6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Top1mtQ8R4U6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Top1mtQ8R4U6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
Top1mtQ8R4U6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.91■■■□□ 2.54
Top1mtQ8R4U6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
Top1mtQ8R4U6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Top1mtQ8R4U6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Top1mtQ8R4U6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.54
Top1mtQ8R4U6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.88■■■□□ 2.53
Top1mtQ8R4U6 Peli2-204ENSMUST00000226513 1320 ntBASIC30.88■■■□□ 2.53
Top1mtQ8R4U6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Top1mtQ8R4U6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Top1mtQ8R4U6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
Top1mtQ8R4U6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Top1mtQ8R4U6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.83■■■□□ 2.53
Top1mtQ8R4U6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Top1mtQ8R4U6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
Top1mtQ8R4U6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Top1mtQ8R4U6 Gm24804-201ENSMUST00000174982 85 ntBASIC30.76■■■□□ 2.51
Top1mtQ8R4U6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Top1mtQ8R4U6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Top1mtQ8R4U6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Top1mtQ8R4U6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.74■■■□□ 2.51
Top1mtQ8R4U6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Top1mtQ8R4U6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Top1mtQ8R4U6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Top1mtQ8R4U6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.71■■■□□ 2.51
Top1mtQ8R4U6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Top1mtQ8R4U6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Top1mtQ8R4U6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Top1mtQ8R4U6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Top1mtQ8R4U6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.69■■■□□ 2.5
Top1mtQ8R4U6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Top1mtQ8R4U6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Top1mtQ8R4U6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Top1mtQ8R4U6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Top1mtQ8R4U6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.66■■■□□ 2.5
Top1mtQ8R4U6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Top1mtQ8R4U6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.62■■■□□ 2.49
Top1mtQ8R4U6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Top1mtQ8R4U6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.61■■■□□ 2.49
Top1mtQ8R4U6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Top1mtQ8R4U6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Top1mtQ8R4U6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Top1mtQ8R4U6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Top1mtQ8R4U6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Top1mtQ8R4U6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Top1mtQ8R4U6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Top1mtQ8R4U6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Top1mtQ8R4U6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Top1mtQ8R4U6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms