Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Chrna3Q8R4G9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.82■■□□□ 1.72
Chrna3Q8R4G9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chrna3Q8R4G9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chrna3Q8R4G9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.8■■□□□ 1.72
Chrna3Q8R4G9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Chrna3Q8R4G9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Chrna3Q8R4G9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Chrna3Q8R4G9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Chrna3Q8R4G9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Chrna3Q8R4G9 Peli2-204ENSMUST00000226513 1320 ntBASIC25.73■■□□□ 1.71
Chrna3Q8R4G9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.73■■□□□ 1.71
Chrna3Q8R4G9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Chrna3Q8R4G9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Chrna3Q8R4G9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chrna3Q8R4G9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Chrna3Q8R4G9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chrna3Q8R4G9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chrna3Q8R4G9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Chrna3Q8R4G9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Chrna3Q8R4G9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Chrna3Q8R4G9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Chrna3Q8R4G9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Chrna3Q8R4G9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Chrna3Q8R4G9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Chrna3Q8R4G9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Chrna3Q8R4G9 Gm16148-201ENSMUST00000119653 893 ntBASIC25.6■■□□□ 1.69
Chrna3Q8R4G9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.59■■□□□ 1.69
Chrna3Q8R4G9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.56■■□□□ 1.68
Chrna3Q8R4G9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Chrna3Q8R4G9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Chrna3Q8R4G9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Chrna3Q8R4G9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Chrna3Q8R4G9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Chrna3Q8R4G9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Chrna3Q8R4G9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Chrna3Q8R4G9 Zfp131-205ENSMUST00000223812 663 ntBASIC25.47■■□□□ 1.67
Chrna3Q8R4G9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Chrna3Q8R4G9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
Chrna3Q8R4G9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Chrna3Q8R4G9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Chrna3Q8R4G9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Chrna3Q8R4G9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
Chrna3Q8R4G9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Chrna3Q8R4G9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Chrna3Q8R4G9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Chrna3Q8R4G9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Chrna3Q8R4G9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.37■■□□□ 1.65
Chrna3Q8R4G9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Chrna3Q8R4G9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Chrna3Q8R4G9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Chrna3Q8R4G9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Chrna3Q8R4G9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Chrna3Q8R4G9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Chrna3Q8R4G9 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.32■■□□□ 1.64
Chrna3Q8R4G9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
Chrna3Q8R4G9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.29■■□□□ 1.64
Chrna3Q8R4G9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.28■■□□□ 1.64
Chrna3Q8R4G9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.28■■□□□ 1.64
Chrna3Q8R4G9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Chrna3Q8R4G9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Chrna3Q8R4G9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Chrna3Q8R4G9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chrna3Q8R4G9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chrna3Q8R4G9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Chrna3Q8R4G9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Chrna3Q8R4G9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Chrna3Q8R4G9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Chrna3Q8R4G9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Chrna3Q8R4G9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Chrna3Q8R4G9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.22■■□□□ 1.63
Chrna3Q8R4G9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Chrna3Q8R4G9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Chrna3Q8R4G9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.2■■□□□ 1.63
Chrna3Q8R4G9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Chrna3Q8R4G9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Chrna3Q8R4G9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Chrna3Q8R4G9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Chrna3Q8R4G9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Chrna3Q8R4G9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
Chrna3Q8R4G9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.16■■□□□ 1.62
Chrna3Q8R4G9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
Chrna3Q8R4G9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.14■■□□□ 1.62
Chrna3Q8R4G9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.14■■□□□ 1.62
Chrna3Q8R4G9 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.14■■□□□ 1.61
Chrna3Q8R4G9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Chrna3Q8R4G9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Chrna3Q8R4G9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.11■■□□□ 1.61
Chrna3Q8R4G9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chrna3Q8R4G9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
Chrna3Q8R4G9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Chrna3Q8R4G9 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.09■■□□□ 1.61
Chrna3Q8R4G9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Chrna3Q8R4G9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Chrna3Q8R4G9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Chrna3Q8R4G9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Chrna3Q8R4G9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Chrna3Q8R4G9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Chrna3Q8R4G9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Chrna3Q8R4G9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms