Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Nup85Q8R480 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Nup85Q8R480 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Nup85Q8R480 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Nup85Q8R480 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Nup85Q8R480 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Nup85Q8R480 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Nup85Q8R480 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Nup85Q8R480 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Nup85Q8R480 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Nup85Q8R480 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Nup85Q8R480 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Nup85Q8R480 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.64■■□□□ 1.85
Nup85Q8R480 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Nup85Q8R480 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Nup85Q8R480 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.6■■□□□ 1.85
Nup85Q8R480 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.59■■□□□ 1.85
Nup85Q8R480 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Nup85Q8R480 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Nup85Q8R480 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Nup85Q8R480 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Nup85Q8R480 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nup85Q8R480 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.54■■□□□ 1.84
Nup85Q8R480 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Nup85Q8R480 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
Nup85Q8R480 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.49■■□□□ 1.83
Nup85Q8R480 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nup85Q8R480 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Nup85Q8R480 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Nup85Q8R480 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Nup85Q8R480 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Nup85Q8R480 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Nup85Q8R480 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Nup85Q8R480 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.41■■□□□ 1.82
Nup85Q8R480 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nup85Q8R480 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nup85Q8R480 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nup85Q8R480 Zfp131-205ENSMUST00000223812 663 ntBASIC26.36■■□□□ 1.81
Nup85Q8R480 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Nup85Q8R480 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nup85Q8R480 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Nup85Q8R480 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nup85Q8R480 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nup85Q8R480 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.27■■□□□ 1.8
Nup85Q8R480 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Nup85Q8R480 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nup85Q8R480 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Nup85Q8R480 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nup85Q8R480 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nup85Q8R480 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nup85Q8R480 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nup85Q8R480 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
Nup85Q8R480 Peli2-204ENSMUST00000226513 1320 ntBASIC26.23■■□□□ 1.79
Nup85Q8R480 Gm16148-201ENSMUST00000119653 893 ntBASIC26.23■■□□□ 1.79
Nup85Q8R480 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nup85Q8R480 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nup85Q8R480 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.21■■□□□ 1.79
Nup85Q8R480 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nup85Q8R480 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nup85Q8R480 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Nup85Q8R480 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nup85Q8R480 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Nup85Q8R480 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nup85Q8R480 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Nup85Q8R480 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nup85Q8R480 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Nup85Q8R480 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nup85Q8R480 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Nup85Q8R480 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.14■■□□□ 1.78
Nup85Q8R480 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nup85Q8R480 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nup85Q8R480 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Nup85Q8R480 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.11■■□□□ 1.77
Nup85Q8R480 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.1■■□□□ 1.77
Nup85Q8R480 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nup85Q8R480 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Nup85Q8R480 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.09■■□□□ 1.77
Nup85Q8R480 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Nup85Q8R480 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Nup85Q8R480 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Nup85Q8R480 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Nup85Q8R480 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nup85Q8R480 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.03■■□□□ 1.76
Nup85Q8R480 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nup85Q8R480 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Nup85Q8R480 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nup85Q8R480 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Nup85Q8R480 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
Nup85Q8R480 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Nup85Q8R480 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Nup85Q8R480 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Nup85Q8R480 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Nup85Q8R480 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Nup85Q8R480 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Nup85Q8R480 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nup85Q8R480 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nup85Q8R480 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.89■■□□□ 1.74
Nup85Q8R480 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nup85Q8R480 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.88■■□□□ 1.73
Nup85Q8R480 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms