Protein–RNA interactions for Protein: Q8R2V2

Iffo2, Intermediate filament family orphan 2, mousemouse

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Iffo2Q8R2V2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Iffo2Q8R2V2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Iffo2Q8R2V2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Iffo2Q8R2V2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.93■■■□□ 2.54
Iffo2Q8R2V2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Iffo2Q8R2V2 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.91■■■□□ 2.54
Iffo2Q8R2V2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Iffo2Q8R2V2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.89■■■□□ 2.53
Iffo2Q8R2V2 Mipep-204ENSMUST00000225043 1548 ntBASIC30.87■■■□□ 2.53
Iffo2Q8R2V2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Iffo2Q8R2V2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Iffo2Q8R2V2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Iffo2Q8R2V2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Iffo2Q8R2V2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.83■■■□□ 2.53
Iffo2Q8R2V2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.81■■■□□ 2.52
Iffo2Q8R2V2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Iffo2Q8R2V2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Iffo2Q8R2V2 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.78■■■□□ 2.52
Iffo2Q8R2V2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Iffo2Q8R2V2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.77■■■□□ 2.52
Iffo2Q8R2V2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Iffo2Q8R2V2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Iffo2Q8R2V2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Iffo2Q8R2V2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
Iffo2Q8R2V2 Gm27322-201ENSMUST00000184007 104 ntBASIC30.69■■■□□ 2.5
Iffo2Q8R2V2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Iffo2Q8R2V2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.66■■■□□ 2.5
Iffo2Q8R2V2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Iffo2Q8R2V2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Iffo2Q8R2V2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Iffo2Q8R2V2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Iffo2Q8R2V2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.57■■■□□ 2.48
Iffo2Q8R2V2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Iffo2Q8R2V2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Iffo2Q8R2V2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Iffo2Q8R2V2 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.53■■■□□ 2.48
Iffo2Q8R2V2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Iffo2Q8R2V2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Iffo2Q8R2V2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Iffo2Q8R2V2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Iffo2Q8R2V2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Iffo2Q8R2V2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Iffo2Q8R2V2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Iffo2Q8R2V2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Iffo2Q8R2V2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Iffo2Q8R2V2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Iffo2Q8R2V2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Iffo2Q8R2V2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Iffo2Q8R2V2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Iffo2Q8R2V2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.38■■■□□ 2.45
Iffo2Q8R2V2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Iffo2Q8R2V2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Iffo2Q8R2V2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.35■■■□□ 2.45
Iffo2Q8R2V2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Iffo2Q8R2V2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Iffo2Q8R2V2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Iffo2Q8R2V2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.32■■■□□ 2.44
Iffo2Q8R2V2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Iffo2Q8R2V2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Iffo2Q8R2V2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Iffo2Q8R2V2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Iffo2Q8R2V2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.3■■■□□ 2.44
Iffo2Q8R2V2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Iffo2Q8R2V2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.44
Iffo2Q8R2V2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Iffo2Q8R2V2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Iffo2Q8R2V2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.25■■■□□ 2.43
Iffo2Q8R2V2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.25■■■□□ 2.43
Iffo2Q8R2V2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Iffo2Q8R2V2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Iffo2Q8R2V2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Iffo2Q8R2V2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
Iffo2Q8R2V2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Iffo2Q8R2V2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
Iffo2Q8R2V2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Iffo2Q8R2V2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.17■■■□□ 2.42
Iffo2Q8R2V2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Iffo2Q8R2V2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Iffo2Q8R2V2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Iffo2Q8R2V2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Iffo2Q8R2V2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Iffo2Q8R2V2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
Iffo2Q8R2V2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
Iffo2Q8R2V2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Iffo2Q8R2V2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Iffo2Q8R2V2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Iffo2Q8R2V2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Iffo2Q8R2V2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.1■■■□□ 2.41
Iffo2Q8R2V2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Iffo2Q8R2V2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Iffo2Q8R2V2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.41
Iffo2Q8R2V2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Iffo2Q8R2V2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
Iffo2Q8R2V2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Iffo2Q8R2V2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Iffo2Q8R2V2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Iffo2Q8R2V2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Iffo2Q8R2V2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Iffo2Q8R2V2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Iffo2Q8R2V2 Tdp2-203ENSMUST00000223804 1136 ntBASIC30■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms