Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
H2afjQ8R1M2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
H2afjQ8R1M2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
H2afjQ8R1M2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.83■■□□□ 1.41
H2afjQ8R1M2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
H2afjQ8R1M2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
H2afjQ8R1M2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
H2afjQ8R1M2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
H2afjQ8R1M2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.78■■□□□ 1.4
H2afjQ8R1M2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
H2afjQ8R1M2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
H2afjQ8R1M2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
H2afjQ8R1M2 Mipep-204ENSMUST00000225043 1548 ntBASIC23.75■■□□□ 1.39
H2afjQ8R1M2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
H2afjQ8R1M2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.75■■□□□ 1.39
H2afjQ8R1M2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.75■■□□□ 1.39
H2afjQ8R1M2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
H2afjQ8R1M2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
H2afjQ8R1M2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
H2afjQ8R1M2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H2afjQ8R1M2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.73■■□□□ 1.39
H2afjQ8R1M2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
H2afjQ8R1M2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.73■■□□□ 1.39
H2afjQ8R1M2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H2afjQ8R1M2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.7■■□□□ 1.38
H2afjQ8R1M2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
H2afjQ8R1M2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
H2afjQ8R1M2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
H2afjQ8R1M2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
H2afjQ8R1M2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
H2afjQ8R1M2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.65■■□□□ 1.38
H2afjQ8R1M2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2afjQ8R1M2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2afjQ8R1M2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
H2afjQ8R1M2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
H2afjQ8R1M2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.64■■□□□ 1.38
H2afjQ8R1M2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
H2afjQ8R1M2 Gm27322-201ENSMUST00000184007 104 ntBASIC23.63■■□□□ 1.37
H2afjQ8R1M2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
H2afjQ8R1M2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
H2afjQ8R1M2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H2afjQ8R1M2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
H2afjQ8R1M2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
H2afjQ8R1M2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
H2afjQ8R1M2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
H2afjQ8R1M2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.59■■□□□ 1.37
H2afjQ8R1M2 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.59■■□□□ 1.37
H2afjQ8R1M2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
H2afjQ8R1M2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
H2afjQ8R1M2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
H2afjQ8R1M2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
H2afjQ8R1M2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
H2afjQ8R1M2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
H2afjQ8R1M2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
H2afjQ8R1M2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
H2afjQ8R1M2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
H2afjQ8R1M2 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.49■■□□□ 1.35
H2afjQ8R1M2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
H2afjQ8R1M2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.48■■□□□ 1.35
H2afjQ8R1M2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
H2afjQ8R1M2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
H2afjQ8R1M2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
H2afjQ8R1M2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
H2afjQ8R1M2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
H2afjQ8R1M2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
H2afjQ8R1M2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
H2afjQ8R1M2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
H2afjQ8R1M2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
H2afjQ8R1M2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
H2afjQ8R1M2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
H2afjQ8R1M2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
H2afjQ8R1M2 Gm26115-201ENSMUST00000175605 87 ntBASIC23.4■■□□□ 1.34
H2afjQ8R1M2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
H2afjQ8R1M2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
H2afjQ8R1M2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.4■■□□□ 1.34
H2afjQ8R1M2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
H2afjQ8R1M2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
H2afjQ8R1M2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
H2afjQ8R1M2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
H2afjQ8R1M2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
H2afjQ8R1M2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
H2afjQ8R1M2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
H2afjQ8R1M2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
H2afjQ8R1M2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
H2afjQ8R1M2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
H2afjQ8R1M2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
H2afjQ8R1M2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
H2afjQ8R1M2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
H2afjQ8R1M2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
H2afjQ8R1M2 Gm8109-201ENSMUST00000194076 746 ntBASIC23.3■■□□□ 1.32
H2afjQ8R1M2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
H2afjQ8R1M2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
H2afjQ8R1M2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
H2afjQ8R1M2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
H2afjQ8R1M2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.29■■□□□ 1.32
H2afjQ8R1M2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
H2afjQ8R1M2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
H2afjQ8R1M2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
H2afjQ8R1M2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
H2afjQ8R1M2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms