Protein–RNA interactions for Protein: Q8K406

Lgi3, Leucine-rich repeat LGI family member 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi3Q8K406 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lgi3Q8K406 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Lgi3Q8K406 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lgi3Q8K406 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lgi3Q8K406 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lgi3Q8K406 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lgi3Q8K406 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lgi3Q8K406 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lgi3Q8K406 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.16■■□□□ 1.14
Lgi3Q8K406 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lgi3Q8K406 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Lgi3Q8K406 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Lgi3Q8K406 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lgi3Q8K406 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lgi3Q8K406 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lgi3Q8K406 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.1■■□□□ 1.13
Lgi3Q8K406 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.09■■□□□ 1.13
Lgi3Q8K406 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lgi3Q8K406 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Lgi3Q8K406 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lgi3Q8K406 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lgi3Q8K406 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.06■■□□□ 1.12
Lgi3Q8K406 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Lgi3Q8K406 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lgi3Q8K406 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lgi3Q8K406 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lgi3Q8K406 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lgi3Q8K406 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lgi3Q8K406 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Lgi3Q8K406 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lgi3Q8K406 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.01■■□□□ 1.11
Lgi3Q8K406 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lgi3Q8K406 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.97■■□□□ 1.11
Lgi3Q8K406 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Lgi3Q8K406 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.95■■□□□ 1.1
Lgi3Q8K406 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Lgi3Q8K406 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.94■■□□□ 1.1
Lgi3Q8K406 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lgi3Q8K406 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lgi3Q8K406 Gm27322-201ENSMUST00000184007 104 ntBASIC21.93■■□□□ 1.1
Lgi3Q8K406 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lgi3Q8K406 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Lgi3Q8K406 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lgi3Q8K406 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lgi3Q8K406 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.9■■□□□ 1.1
Lgi3Q8K406 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Lgi3Q8K406 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Lgi3Q8K406 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lgi3Q8K406 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
Lgi3Q8K406 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lgi3Q8K406 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Lgi3Q8K406 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.88■■□□□ 1.09
Lgi3Q8K406 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Lgi3Q8K406 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lgi3Q8K406 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lgi3Q8K406 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lgi3Q8K406 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lgi3Q8K406 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lgi3Q8K406 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lgi3Q8K406 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lgi3Q8K406 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.83■■□□□ 1.09
Lgi3Q8K406 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lgi3Q8K406 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Lgi3Q8K406 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lgi3Q8K406 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lgi3Q8K406 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
Lgi3Q8K406 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lgi3Q8K406 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lgi3Q8K406 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lgi3Q8K406 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Lgi3Q8K406 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lgi3Q8K406 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Lgi3Q8K406 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lgi3Q8K406 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lgi3Q8K406 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lgi3Q8K406 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.74■■□□□ 1.07
Lgi3Q8K406 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Lgi3Q8K406 Zxda-201ENSMUST00000117281 2621 ntBASIC21.73■■□□□ 1.07
Lgi3Q8K406 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lgi3Q8K406 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lgi3Q8K406 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lgi3Q8K406 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Lgi3Q8K406 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.68■■□□□ 1.06
Lgi3Q8K406 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lgi3Q8K406 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Lgi3Q8K406 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Lgi3Q8K406 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lgi3Q8K406 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lgi3Q8K406 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lgi3Q8K406 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lgi3Q8K406 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Lgi3Q8K406 Gm26115-201ENSMUST00000175605 87 ntBASIC21.61■■□□□ 1.05
Lgi3Q8K406 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lgi3Q8K406 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lgi3Q8K406 Gm8109-201ENSMUST00000194076 746 ntBASIC21.6■■□□□ 1.05
Lgi3Q8K406 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.59■■□□□ 1.05
Lgi3Q8K406 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lgi3Q8K406 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lgi3Q8K406 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lgi3Q8K406 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms